Clarkeanidine

Details

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Internal ID 9d662ea1-4f45-48ee-b245-71063e5c72d5
Taxonomy Alkaloids and derivatives > Protoberberine alkaloids and derivatives
IUPAC Name (13aS)-2,10-dimethoxy-6,8,13,13a-tetrahydro-5H-isoquinolino[2,1-b]isoquinoline-1,9-diol
SMILES (Canonical) COC1=C(C2=C(CCN3C2CC4=C(C3)C(=C(C=C4)OC)O)C=C1)O
SMILES (Isomeric) COC1=C(C2=C(CCN3[C@H]2CC4=C(C3)C(=C(C=C4)OC)O)C=C1)O
InChI InChI=1S/C19H21NO4/c1-23-15-6-4-12-9-14-17-11(3-5-16(24-2)19(17)22)7-8-20(14)10-13(12)18(15)21/h3-6,14,21-22H,7-10H2,1-2H3/t14-/m0/s1
InChI Key VHMQRLIBVWAVSO-AWEZNQCLSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C19H21NO4
Molecular Weight 327.40 g/mol
Exact Mass 327.14705815 g/mol
Topological Polar Surface Area (TPSA) 62.20 Ų
XlogP 2.60
Atomic LogP (AlogP) 2.77
H-Bond Acceptor 5
H-Bond Donor 2
Rotatable Bonds 2

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Clarkeanidine

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8639 86.39%
Caco-2 + 0.8630 86.30%
Blood Brain Barrier + 0.6500 65.00%
Human oral bioavailability - 0.8286 82.86%
Subcellular localzation Mitochondria 0.7978 79.78%
OATP2B1 inhibitior - 0.8563 85.63%
OATP1B1 inhibitior + 0.9478 94.78%
OATP1B3 inhibitior + 0.9463 94.63%
MATE1 inhibitior - 0.8600 86.00%
OCT2 inhibitior - 0.5000 50.00%
BSEP inhibitior + 0.5649 56.49%
P-glycoprotein inhibitior - 0.6301 63.01%
P-glycoprotein substrate - 0.5301 53.01%
CYP3A4 substrate + 0.5751 57.51%
CYP2C9 substrate + 0.7825 78.25%
CYP2D6 substrate + 0.8432 84.32%
CYP3A4 inhibition - 0.8690 86.90%
CYP2C9 inhibition - 0.9071 90.71%
CYP2C19 inhibition + 0.8332 83.32%
CYP2D6 inhibition + 0.8932 89.32%
CYP1A2 inhibition + 0.9107 91.07%
CYP2C8 inhibition - 0.7787 77.87%
CYP inhibitory promiscuity - 0.8633 86.33%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.6645 66.45%
Eye corrosion - 0.9895 98.95%
Eye irritation - 0.8129 81.29%
Skin irritation - 0.7164 71.64%
Skin corrosion - 0.9386 93.86%
Ames mutagenesis - 0.5100 51.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4146 41.46%
Micronuclear + 0.6400 64.00%
Hepatotoxicity - 0.6000 60.00%
skin sensitisation - 0.8933 89.33%
Respiratory toxicity + 0.9111 91.11%
Reproductive toxicity + 0.8111 81.11%
Mitochondrial toxicity + 0.8875 88.75%
Nephrotoxicity - 0.6817 68.17%
Acute Oral Toxicity (c) III 0.4740 47.40%
Estrogen receptor binding + 0.6719 67.19%
Androgen receptor binding + 0.6018 60.18%
Thyroid receptor binding + 0.5557 55.57%
Glucocorticoid receptor binding + 0.6736 67.36%
Aromatase binding - 0.7446 74.46%
PPAR gamma + 0.5934 59.34%
Honey bee toxicity - 0.9140 91.40%
Biodegradation - 0.9500 95.00%
Crustacea aquatic toxicity + 0.5751 57.51%
Fish aquatic toxicity - 0.3947 39.47%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.77% 96.09%
CHEMBL217 P14416 Dopamine D2 receptor 94.84% 95.62%
CHEMBL2041 P07949 Tyrosine-protein kinase receptor RET 93.19% 91.79%
CHEMBL4040 P28482 MAP kinase ERK2 92.59% 83.82%
CHEMBL5608 Q16288 NT-3 growth factor receptor 90.96% 95.89%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 90.71% 91.11%
CHEMBL241 Q14432 Phosphodiesterase 3A 90.50% 92.94%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 89.60% 95.56%
CHEMBL1293249 Q13887 Kruppel-like factor 5 89.23% 86.33%
CHEMBL225 P28335 Serotonin 2c (5-HT2c) receptor 86.44% 89.62%
CHEMBL2056 P21728 Dopamine D1 receptor 85.93% 91.00%
CHEMBL2581 P07339 Cathepsin D 84.57% 98.95%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 84.54% 85.14%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 83.14% 94.45%
CHEMBL2535 P11166 Glucose transporter 82.94% 98.75%
CHEMBL5747 Q92793 CREB-binding protein 82.66% 95.12%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 81.49% 95.89%
CHEMBL4208 P20618 Proteasome component C5 81.04% 90.00%
CHEMBL4895 P30530 Tyrosine-protein kinase receptor UFO 80.91% 90.95%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 80.60% 90.71%
CHEMBL5697 Q9GZT9 Egl nine homolog 1 80.46% 93.40%
CHEMBL1744525 P43490 Nicotinamide phosphoribosyltransferase 80.30% 96.25%
CHEMBL2069156 Q14145 Kelch-like ECH-associated protein 1 80.22% 82.38%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Corydalis clarkei

Cross-Links

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PubChem 127376
NPASS NPC179637
LOTUS LTS0181204
wikiData Q82882915