Circumdatin B

Details

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Internal ID bf370019-4e9b-4578-bdf1-3931297c4779
Taxonomy Organoheterocyclic compounds > Pyrimidodiazepines
IUPAC Name (2S)-18-methoxy-21-oxa-6,14,23-triazapentacyclo[12.9.0.02,6.08,13.016,22]tricosa-1(23),8,10,12,16(22),17,19-heptaene-7,15-dione
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C20H17N3O4/c1-26-12-8-10-27-18-14(11-12)20(25)23-15-6-3-2-5-13(15)19(24)22-9-4-7-16(22)17(23)21-18/h2-3,5-6,8,10-11,16H,4,7,9H2,1H3/t16-/m0/s1
InChI Key VCIODNPNVXXHGP-INIZCTEOSA-N
Popularity 3 references in papers

Physical and Chemical Properties

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Molecular Formula C20H17N3O4
Molecular Weight 363.40 g/mol
Exact Mass 363.12190603 g/mol
Topological Polar Surface Area (TPSA) 71.40 Ų
XlogP 1.60
Atomic LogP (AlogP) 2.42
H-Bond Acceptor 6
H-Bond Donor 0
Rotatable Bonds 1

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Circumdatin B

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9952 99.52%
Caco-2 + 0.7894 78.94%
Blood Brain Barrier + 0.8500 85.00%
Human oral bioavailability - 0.5286 52.86%
Subcellular localzation Mitochondria 0.7011 70.11%
OATP2B1 inhibitior - 0.8587 85.87%
OATP1B1 inhibitior + 0.8586 85.86%
OATP1B3 inhibitior + 0.9422 94.22%
MATE1 inhibitior - 0.7600 76.00%
OCT2 inhibitior - 0.6750 67.50%
BSEP inhibitior + 0.8195 81.95%
P-glycoprotein inhibitior + 0.8319 83.19%
P-glycoprotein substrate + 0.5473 54.73%
CYP3A4 substrate + 0.6824 68.24%
CYP2C9 substrate + 0.5995 59.95%
CYP2D6 substrate - 0.8516 85.16%
CYP3A4 inhibition - 0.7000 70.00%
CYP2C9 inhibition - 0.6086 60.86%
CYP2C19 inhibition - 0.6267 62.67%
CYP2D6 inhibition - 0.8892 88.92%
CYP1A2 inhibition + 0.6327 63.27%
CYP2C8 inhibition + 0.5141 51.41%
CYP inhibitory promiscuity - 0.5080 50.80%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.9200 92.00%
Carcinogenicity (trinary) Non-required 0.5794 57.94%
Eye corrosion - 0.9857 98.57%
Eye irritation - 0.9923 99.23%
Skin irritation - 0.8137 81.37%
Skin corrosion - 0.9473 94.73%
Ames mutagenesis - 0.5000 50.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4295 42.95%
Micronuclear + 0.8100 81.00%
Hepatotoxicity + 0.7376 73.76%
skin sensitisation - 0.8914 89.14%
Respiratory toxicity + 0.8444 84.44%
Reproductive toxicity + 0.8333 83.33%
Mitochondrial toxicity + 0.8625 86.25%
Nephrotoxicity + 0.7442 74.42%
Acute Oral Toxicity (c) III 0.6617 66.17%
Estrogen receptor binding + 0.7451 74.51%
Androgen receptor binding + 0.6836 68.36%
Thyroid receptor binding + 0.7432 74.32%
Glucocorticoid receptor binding + 0.8480 84.80%
Aromatase binding + 0.5734 57.34%
PPAR gamma - 0.6100 61.00%
Honey bee toxicity - 0.9071 90.71%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity + 0.6400 64.00%
Fish aquatic toxicity + 0.8396 83.96%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL1951 P21397 Monoamine oxidase A 98.16% 91.49%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 97.74% 85.14%
CHEMBL2581 P07339 Cathepsin D 96.95% 98.95%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 93.52% 99.23%
CHEMBL1293249 Q13887 Kruppel-like factor 5 93.51% 86.33%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 93.33% 82.69%
CHEMBL230 P35354 Cyclooxygenase-2 93.24% 89.63%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 93.09% 95.56%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 92.52% 96.09%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 91.97% 94.00%
CHEMBL5409 Q8TDU6 G-protein coupled bile acid receptor 1 90.86% 93.65%
CHEMBL3524 P56524 Histone deacetylase 4 90.34% 92.97%
CHEMBL2140 P48775 Tryptophan 2,3-dioxygenase 89.59% 98.46%
CHEMBL5608 Q16288 NT-3 growth factor receptor 87.85% 95.89%
CHEMBL2378 P30307 Dual specificity phosphatase Cdc25C 86.19% 96.67%
CHEMBL264 Q9Y5N1 Histamine H3 receptor 85.43% 91.43%
CHEMBL3137262 O60341 LSD1/CoREST complex 84.50% 97.09%
CHEMBL204 P00734 Thrombin 84.18% 96.01%
CHEMBL2535 P11166 Glucose transporter 83.35% 98.75%
CHEMBL2094127 P06493 Cyclin-dependent kinase 1/cyclin B 82.72% 96.00%
CHEMBL3475 P05121 Plasminogen activator inhibitor-1 80.56% 83.00%
CHEMBL2095172 P14867 GABA-A receptor; alpha-1/beta-2/gamma-2 80.42% 92.67%
CHEMBL5332 Q13164 Mitogen-activated protein kinase 7 80.40% 92.64%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 24895274
LOTUS LTS0145365
wikiData Q75067291