cimifoetiside B

Details

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Internal ID fed3d429-8fec-4584-8ea2-1d25af3adfb3
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins > Cucurbitacin glycosides
IUPAC Name (2S,3R,4S,5S,6R)-2-[(2S,3R,4S,5R)-4,5-dihydroxy-2-[[(1S,2R,3S,4R,7R,9S,12R,14S,17R,18R,19R,21R,22S)-2-hydroxy-22-(2-hydroxypropan-2-yl)-3,8,8,17,19-pentamethyl-23,24-dioxaheptacyclo[19.2.1.01,18.03,17.04,14.07,12.012,14]tetracosan-9-yl]oxy]oxan-3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol
SMILES (Canonical) CC1CC2C(OC3(C1C4(CCC56CC57CCC(C(C7CCC6C4(C3O)C)(C)C)OC8C(C(C(CO8)O)O)OC9C(C(C(C(O9)CO)O)O)O)C)O2)C(C)(C)O
SMILES (Isomeric) C[C@@H]1C[C@@H]2[C@H](O[C@]3([C@H]1[C@]4(CC[C@@]56C[C@@]57CC[C@@H](C([C@@H]7CC[C@H]6[C@@]4([C@H]3O)C)(C)C)O[C@H]8[C@@H]([C@H]([C@@H](CO8)O)O)O[C@H]9[C@@H]([C@H]([C@@H]([C@H](O9)CO)O)O)O)C)O2)C(C)(C)O
InChI InChI=1S/C41H66O14/c1-18-14-20-31(36(4,5)49)55-41(54-20)30(18)37(6)12-13-40-17-39(40)11-10-24(35(2,3)22(39)8-9-23(40)38(37,7)34(41)48)52-33-29(25(44)19(43)16-50-33)53-32-28(47)27(46)26(45)21(15-42)51-32/h18-34,42-49H,8-17H2,1-7H3/t18-,19-,20-,21-,22+,23+,24+,25+,26-,27+,28-,29-,30-,31+,32+,33+,34-,37-,38-,39-,40+,41+/m1/s1
InChI Key MWAASJAPNVCCKT-JHNAHLGXSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C41H66O14
Molecular Weight 783.00 g/mol
Exact Mass 782.44525677 g/mol
Topological Polar Surface Area (TPSA) 217.00 Ų
XlogP 2.10
Atomic LogP (AlogP) 0.95
H-Bond Acceptor 14
H-Bond Donor 8
Rotatable Bonds 6

Synonyms

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(23R,24S) cimicigenol 3-O-beta-D-glucopyranosyl-(1->2)-beta-D-xylopyranoside
(2S,4aR,5aS,7aR,7bR,8R,10R,11S,12aS,13R,13aS,13bR,15aR)-13-hydroxy-11-(2-hydroxypropan-2-yl)-1,1,7a,8,13a-pentamethyloctadecahydro-10,12a-epoxycyclopropa[1',8a']naphtho[2',1':4,5]indeno[2,1-b]oxepin-2-yl 2-O-beta-D-glucopyranosyl-beta-D-xylopyranoside
CHEBI:65633
Q27134102

2D Structure

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2D Structure of cimifoetiside B

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.5750 57.50%
Caco-2 - 0.8753 87.53%
Blood Brain Barrier - 0.6250 62.50%
Human oral bioavailability - 0.8000 80.00%
Subcellular localzation Mitochondria 0.6150 61.50%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8327 83.27%
OATP1B3 inhibitior + 0.9371 93.71%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior + 0.5250 52.50%
BSEP inhibitior - 0.8741 87.41%
P-glycoprotein inhibitior + 0.7534 75.34%
P-glycoprotein substrate + 0.5626 56.26%
CYP3A4 substrate + 0.7301 73.01%
CYP2C9 substrate - 0.8016 80.16%
CYP2D6 substrate - 0.8328 83.28%
CYP3A4 inhibition - 0.9241 92.41%
CYP2C9 inhibition - 0.8017 80.17%
CYP2C19 inhibition - 0.8330 83.30%
CYP2D6 inhibition - 0.9431 94.31%
CYP1A2 inhibition - 0.8946 89.46%
CYP2C8 inhibition + 0.7623 76.23%
CYP inhibitory promiscuity - 0.9524 95.24%
UGT catelyzed + 0.9000 90.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.6376 63.76%
Eye corrosion - 0.9891 98.91%
Eye irritation - 0.9087 90.87%
Skin irritation - 0.7097 70.97%
Skin corrosion - 0.9446 94.46%
Ames mutagenesis - 0.6524 65.24%
Human Ether-a-go-go-Related Gene inhibition + 0.6933 69.33%
Micronuclear - 0.8000 80.00%
Hepatotoxicity - 0.6800 68.00%
skin sensitisation - 0.9091 90.91%
Respiratory toxicity - 0.5111 51.11%
Reproductive toxicity + 0.7000 70.00%
Mitochondrial toxicity - 0.5875 58.75%
Nephrotoxicity - 0.8146 81.46%
Acute Oral Toxicity (c) I 0.6862 68.62%
Estrogen receptor binding + 0.6471 64.71%
Androgen receptor binding + 0.7575 75.75%
Thyroid receptor binding - 0.5788 57.88%
Glucocorticoid receptor binding + 0.5783 57.83%
Aromatase binding + 0.6767 67.67%
PPAR gamma + 0.7199 71.99%
Honey bee toxicity - 0.6287 62.87%
Biodegradation - 0.7000 70.00%
Crustacea aquatic toxicity - 0.5500 55.00%
Fish aquatic toxicity + 0.8309 83.09%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL253 P34972 Cannabinoid CB2 receptor 99.50% 97.25%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.87% 91.11%
CHEMBL3137262 O60341 LSD1/CoREST complex 95.09% 97.09%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 94.61% 96.77%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 93.31% 96.09%
CHEMBL218 P21554 Cannabinoid CB1 receptor 92.56% 96.61%
CHEMBL226 P30542 Adenosine A1 receptor 92.51% 95.93%
CHEMBL5888 Q99558 Mitogen-activated protein kinase kinase kinase 14 92.30% 100.00%
CHEMBL1907605 P24864 Cyclin-dependent kinase 2/cyclin E1 91.99% 92.88%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 91.01% 96.95%
CHEMBL2996 Q05655 Protein kinase C delta 90.76% 97.79%
CHEMBL6136 O60341 Lysine-specific histone demethylase 1 90.34% 95.58%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 89.72% 97.14%
CHEMBL1293267 Q9HC97 G-protein coupled receptor 35 88.88% 89.34%
CHEMBL241 Q14432 Phosphodiesterase 3A 88.47% 92.94%
CHEMBL1937 Q92769 Histone deacetylase 2 88.23% 94.75%
CHEMBL206 P03372 Estrogen receptor alpha 88.12% 97.64%
CHEMBL220 P22303 Acetylcholinesterase 86.96% 94.45%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 85.78% 95.50%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 85.59% 92.86%
CHEMBL4051 P13569 Cystic fibrosis transmembrane conductance regulator 85.34% 95.71%
CHEMBL325 Q13547 Histone deacetylase 1 84.76% 95.92%
CHEMBL2581 P07339 Cathepsin D 84.65% 98.95%
CHEMBL3145 P42338 PI3-kinase p110-beta subunit 84.46% 98.75%
CHEMBL1293249 Q13887 Kruppel-like factor 5 84.28% 86.33%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 84.00% 91.24%
CHEMBL1994 P08235 Mineralocorticoid receptor 83.51% 100.00%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 83.36% 100.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 83.35% 95.89%
CHEMBL3230 O95977 Sphingosine 1-phosphate receptor Edg-6 83.19% 94.01%
CHEMBL3713062 P10646 Tissue factor pathway inhibitor 83.03% 97.33%
CHEMBL1806 P11388 DNA topoisomerase II alpha 82.07% 89.00%
CHEMBL1977 P11473 Vitamin D receptor 82.00% 99.43%
CHEMBL2243 O00519 Anandamide amidohydrolase 81.47% 97.53%
CHEMBL4618 P09960 Leukotriene A4 hydrolase 81.40% 97.86%
CHEMBL233 P35372 Mu opioid receptor 81.26% 97.93%
CHEMBL5255 O00206 Toll-like receptor 4 80.39% 92.50%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 80.22% 95.56%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Actaea cimicifuga

Cross-Links

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PubChem 70680265
LOTUS LTS0164622
wikiData Q27134102