Cimicinol

Details

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Internal ID b5423d75-68bc-473e-95a3-467b57ff2cbd
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Triterpenoids
IUPAC Name (2S,3R,4S,5R)-2-[[(1R,3R,7R,9S,17R,18R,19R,21R,22R)-22-(2-hydroxypropan-2-yl)-3,8,8,17,19-pentamethyl-23,24-dioxahexacyclo[19.2.1.01,18.03,17.04,14.07,12]tetracosa-4,11,14-trien-9-yl]oxy]oxane-3,4,5-triol
SMILES (Canonical) CC1CC2C(OC3(C1C4(CC=C5CC6=CCC(C(C6CC=C5C4(C3)C)(C)C)OC7C(C(C(CO7)O)O)O)C)O2)C(C)(C)O
SMILES (Isomeric) C[C@@H]1C[C@@H]2[C@@H](O[C@]3([C@H]1[C@]4(CC=C5CC6=CC[C@@H](C([C@@H]6CC=C5[C@@]4(C3)C)(C)C)O[C@H]7[C@@H]([C@H]([C@@H](CO7)O)O)O)C)O2)C(C)(C)O
InChI InChI=1S/C35H52O8/c1-18-14-24-29(32(4,5)39)43-35(42-24)17-34(7)22-10-9-21-19(15-20(22)12-13-33(34,6)28(18)35)8-11-25(31(21,2)3)41-30-27(38)26(37)23(36)16-40-30/h8,10,12,18,21,23-30,36-39H,9,11,13-17H2,1-7H3/t18-,21-,23-,24-,25+,26+,27-,28-,29-,30+,33-,34+,35-/m1/s1
InChI Key YPGMQGITTGQZFY-FOVWXURSSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C35H52O8
Molecular Weight 600.80 g/mol
Exact Mass 600.36621861 g/mol
Topological Polar Surface Area (TPSA) 118.00 Ų
XlogP 2.90
Atomic LogP (AlogP) 4.16
H-Bond Acceptor 8
H-Bond Donor 4
Rotatable Bonds 3

Synonyms

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161239-02-7

2D Structure

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2D Structure of Cimicinol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9176 91.76%
Caco-2 - 0.8098 80.98%
Blood Brain Barrier - 0.8250 82.50%
Human oral bioavailability - 0.6286 62.86%
Subcellular localzation Mitochondria 0.7144 71.44%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8601 86.01%
OATP1B3 inhibitior + 0.9361 93.61%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.9250 92.50%
BSEP inhibitior + 0.8093 80.93%
P-glycoprotein inhibitior + 0.7229 72.29%
P-glycoprotein substrate + 0.6438 64.38%
CYP3A4 substrate + 0.7179 71.79%
CYP2C9 substrate - 0.8022 80.22%
CYP2D6 substrate - 0.8425 84.25%
CYP3A4 inhibition - 0.8935 89.35%
CYP2C9 inhibition - 0.8287 82.87%
CYP2C19 inhibition - 0.8789 87.89%
CYP2D6 inhibition - 0.9201 92.01%
CYP1A2 inhibition - 0.8551 85.51%
CYP2C8 inhibition + 0.7526 75.26%
CYP inhibitory promiscuity - 0.9041 90.41%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.5540 55.40%
Eye corrosion - 0.9884 98.84%
Eye irritation - 0.9285 92.85%
Skin irritation - 0.6159 61.59%
Skin corrosion - 0.9381 93.81%
Ames mutagenesis - 0.5079 50.79%
Human Ether-a-go-go-Related Gene inhibition + 0.7757 77.57%
Micronuclear - 0.7400 74.00%
Hepatotoxicity - 0.5302 53.02%
skin sensitisation - 0.8521 85.21%
Respiratory toxicity + 0.6111 61.11%
Reproductive toxicity + 0.9111 91.11%
Mitochondrial toxicity + 0.6125 61.25%
Nephrotoxicity - 0.8592 85.92%
Acute Oral Toxicity (c) III 0.4470 44.70%
Estrogen receptor binding + 0.6551 65.51%
Androgen receptor binding + 0.7348 73.48%
Thyroid receptor binding + 0.5684 56.84%
Glucocorticoid receptor binding + 0.6806 68.06%
Aromatase binding + 0.6792 67.92%
PPAR gamma + 0.6403 64.03%
Honey bee toxicity - 0.6389 63.89%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity + 0.5700 57.00%
Fish aquatic toxicity + 0.9821 98.21%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL253 P34972 Cannabinoid CB2 receptor 98.06% 97.25%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.34% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.41% 96.09%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 94.29% 96.77%
CHEMBL3137262 O60341 LSD1/CoREST complex 90.69% 97.09%
CHEMBL218 P21554 Cannabinoid CB1 receptor 89.52% 96.61%
CHEMBL2581 P07339 Cathepsin D 87.51% 98.95%
CHEMBL241 Q14432 Phosphodiesterase 3A 87.19% 92.94%
CHEMBL1907605 P24864 Cyclin-dependent kinase 2/cyclin E1 85.65% 92.88%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 85.31% 94.00%
CHEMBL2335 P42785 Lysosomal Pro-X carboxypeptidase 84.30% 100.00%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 82.63% 85.14%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 82.59% 97.14%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 81.94% 95.56%
CHEMBL3401 O75469 Pregnane X receptor 81.64% 94.73%
CHEMBL1994 P08235 Mineralocorticoid receptor 81.15% 100.00%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 80.37% 82.69%
CHEMBL259 P32245 Melanocortin receptor 4 80.27% 95.38%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Actaea cimicifuga
Actaea dahurica
Actaea simplex

Cross-Links

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PubChem 102146755
NPASS NPC293391
LOTUS LTS0080898
wikiData Q105351666