CID 24879111

Details

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Internal ID b6d8b866-cf79-457d-80a2-f62acecb1e2e
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides
IUPAC Name 5-[(E)-2-[(2S,3R,4S)-3-ethenyl-5-methoxycarbonyl-2-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-3,4-dihydro-2H-pyran-4-yl]ethenyl]-1-(2-hydroxyethyl)pyridin-1-ium-3-carboxylic acid
SMILES (Canonical) COC(=O)C1=COC(C(C1C=CC2=CC(=C[N+](=C2)CCO)C(=O)O)C=C)OC3C(C(C(C(O3)CO)O)O)O
SMILES (Isomeric) COC(=O)C1=CO[C@H]([C@@H]([C@@H]1/C=C/C2=CC(=C[N+](=C2)CCO)C(=O)O)C=C)O[C@H]3[C@@H]([C@H]([C@@H]([C@H](O3)CO)O)O)O
InChI InChI=1S/C25H31NO12/c1-3-15-16(5-4-13-8-14(22(32)33)10-26(9-13)6-7-27)17(23(34)35-2)12-36-24(15)38-25-21(31)20(30)19(29)18(11-28)37-25/h3-5,8-10,12,15-16,18-21,24-25,27-31H,1,6-7,11H2,2H3/p+1/b5-4+/t15-,16+,18-,19-,20+,21-,24+,25+/m1/s1
InChI Key FPYKDTSNMCSLIB-ZHDNQQBJSA-O
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C25H32NO12+
Molecular Weight 538.50 g/mol
Exact Mass 538.19245046 g/mol
Topological Polar Surface Area (TPSA) 196.00 Ų
XlogP -0.90
Atomic LogP (AlogP) -1.67
H-Bond Acceptor 11
H-Bond Donor 6
Rotatable Bonds 10

Synonyms

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5-[(E)-2-[(2S,3R,4S)-3-ethenyl-5-methoxycarbonyl-2-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-3,4-dihydro-2H-pyran-4-yl]ethenyl]-1-(2-hydroxyethyl)pyridin-1-ium-3-carboxylic acid

2D Structure

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2D Structure of CID 24879111

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.9548 95.48%
Caco-2 - 0.8977 89.77%
Blood Brain Barrier - 0.7000 70.00%
Human oral bioavailability - 0.7143 71.43%
Subcellular localzation Mitochondria 0.4170 41.70%
OATP2B1 inhibitior - 0.7185 71.85%
OATP1B1 inhibitior + 0.7621 76.21%
OATP1B3 inhibitior + 0.9417 94.17%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.8500 85.00%
BSEP inhibitior - 0.5000 50.00%
P-glycoprotein inhibitior - 0.5303 53.03%
P-glycoprotein substrate - 0.5761 57.61%
CYP3A4 substrate + 0.6494 64.94%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8738 87.38%
CYP3A4 inhibition - 0.9450 94.50%
CYP2C9 inhibition - 0.7335 73.35%
CYP2C19 inhibition - 0.8179 81.79%
CYP2D6 inhibition - 0.8766 87.66%
CYP1A2 inhibition - 0.7878 78.78%
CYP2C8 inhibition + 0.7177 71.77%
CYP inhibitory promiscuity - 0.9402 94.02%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9400 94.00%
Carcinogenicity (trinary) Non-required 0.5506 55.06%
Eye corrosion - 0.9827 98.27%
Eye irritation - 0.9354 93.54%
Skin irritation - 0.7674 76.74%
Skin corrosion - 0.9235 92.35%
Ames mutagenesis + 0.5407 54.07%
Human Ether-a-go-go-Related Gene inhibition - 0.5145 51.45%
Micronuclear + 0.6300 63.00%
Hepatotoxicity - 0.6466 64.66%
skin sensitisation - 0.8541 85.41%
Respiratory toxicity + 0.6889 68.89%
Reproductive toxicity + 0.8111 81.11%
Mitochondrial toxicity + 0.8250 82.50%
Nephrotoxicity + 0.6558 65.58%
Acute Oral Toxicity (c) III 0.5792 57.92%
Estrogen receptor binding + 0.6976 69.76%
Androgen receptor binding + 0.5832 58.32%
Thyroid receptor binding + 0.5326 53.26%
Glucocorticoid receptor binding + 0.6039 60.39%
Aromatase binding + 0.5749 57.49%
PPAR gamma + 0.6454 64.54%
Honey bee toxicity - 0.7309 73.09%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity - 0.7300 73.00%
Fish aquatic toxicity - 0.8132 81.32%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 95.31% 96.00%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.02% 96.09%
CHEMBL1293294 P51151 Ras-related protein Rab-9A 94.36% 87.67%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 93.48% 91.11%
CHEMBL1293249 Q13887 Kruppel-like factor 5 92.47% 86.33%
CHEMBL3401 O75469 Pregnane X receptor 92.32% 94.73%
CHEMBL3060 Q9Y345 Glycine transporter 2 90.56% 99.17%
CHEMBL3714130 P46095 G-protein coupled receptor 6 88.25% 97.36%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 86.60% 86.92%
CHEMBL1293267 Q9HC97 G-protein coupled receptor 35 86.14% 89.34%
CHEMBL5255 O00206 Toll-like receptor 4 82.25% 92.50%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 81.15% 95.56%
CHEMBL4208 P20618 Proteasome component C5 81.13% 90.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Lonicera japonica

Cross-Links

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PubChem 24879111
LOTUS LTS0199763
wikiData Q104999466