Chrysobactin

Details

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Internal ID fbbd8c50-53d8-43ff-a2c8-2ed295750ceb
Taxonomy Organic acids and derivatives > Carboxylic acids and derivatives > Amino acids, peptides, and analogues > Peptides > Dipeptides
IUPAC Name (2S)-2-[[(2R)-6-amino-2-[(2,3-dihydroxybenzoyl)amino]hexanoyl]amino]-3-hydroxypropanoic acid
SMILES (Canonical) C1=CC(=C(C(=C1)O)O)C(=O)NC(CCCCN)C(=O)NC(CO)C(=O)O
SMILES (Isomeric) C1=CC(=C(C(=C1)O)O)C(=O)N[C@H](CCCCN)C(=O)N[C@@H](CO)C(=O)O
InChI InChI=1S/C16H23N3O7/c17-7-2-1-5-10(15(24)19-11(8-20)16(25)26)18-14(23)9-4-3-6-12(21)13(9)22/h3-4,6,10-11,20-22H,1-2,5,7-8,17H2,(H,18,23)(H,19,24)(H,25,26)/t10-,11+/m1/s1
InChI Key NNTXFOAPABMVEG-MNOVXSKESA-N
Popularity 20 references in papers

Physical and Chemical Properties

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Molecular Formula C16H23N3O7
Molecular Weight 369.37 g/mol
Exact Mass 369.15360008 g/mol
Topological Polar Surface Area (TPSA) 182.00 Ų
XlogP -2.80
Atomic LogP (AlogP) -1.11
H-Bond Acceptor 7
H-Bond Donor 7
Rotatable Bonds 10

Synonyms

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120124-51-8
2-(2,3-dihydroxybenzoyl)-D-lysyl-L-serine
N(2)-(2,3-dihydroxybenzoyl)-D-lysyl-L-serine
(2S)-2-[[(2R)-6-amino-2-[(2,3-dihydroxybenzoyl)amino]hexanoyl]amino]-3-hydroxypropanoic acid
N-(N(2)-(2,3-Dihydroxybenzoyl)lysyl)serine
CHEBI:61345
DTXSID10152685
AKOS040751166
(2,3-dihydroxybenzoyl)-D-lysyl-L-serine
L-Serine, N-(N2-(2,3-dihydroxybenzoyl)-D-lysyl)-
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Chrysobactin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6512 65.12%
Caco-2 - 0.9400 94.00%
Blood Brain Barrier - 0.7750 77.50%
Human oral bioavailability - 0.5000 50.00%
Subcellular localzation Nucleus 0.5667 56.67%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9396 93.96%
OATP1B3 inhibitior + 0.9403 94.03%
MATE1 inhibitior - 0.8800 88.00%
OCT2 inhibitior - 1.0000 100.00%
BSEP inhibitior - 0.9301 93.01%
P-glycoprotein inhibitior - 0.9070 90.70%
P-glycoprotein substrate + 0.5517 55.17%
CYP3A4 substrate - 0.5173 51.73%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8276 82.76%
CYP3A4 inhibition - 0.9400 94.00%
CYP2C9 inhibition - 0.9351 93.51%
CYP2C19 inhibition - 0.8495 84.95%
CYP2D6 inhibition - 0.9127 91.27%
CYP1A2 inhibition - 0.8369 83.69%
CYP2C8 inhibition - 0.8462 84.62%
CYP inhibitory promiscuity - 0.9754 97.54%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.7611 76.11%
Carcinogenicity (trinary) Non-required 0.7608 76.08%
Eye corrosion - 0.9911 99.11%
Eye irritation - 0.9868 98.68%
Skin irritation - 0.7742 77.42%
Skin corrosion - 0.9406 94.06%
Ames mutagenesis - 0.7000 70.00%
Human Ether-a-go-go-Related Gene inhibition - 0.5824 58.24%
Micronuclear + 0.7600 76.00%
Hepatotoxicity - 0.6614 66.14%
skin sensitisation - 0.8643 86.43%
Respiratory toxicity + 0.6333 63.33%
Reproductive toxicity + 0.8595 85.95%
Mitochondrial toxicity + 0.8750 87.50%
Nephrotoxicity - 0.6235 62.35%
Acute Oral Toxicity (c) III 0.7627 76.27%
Estrogen receptor binding + 0.6379 63.79%
Androgen receptor binding + 0.6473 64.73%
Thyroid receptor binding - 0.5916 59.16%
Glucocorticoid receptor binding + 0.5626 56.26%
Aromatase binding - 0.5582 55.82%
PPAR gamma + 0.5635 56.35%
Honey bee toxicity - 0.9331 93.31%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity - 0.7400 74.00%
Fish aquatic toxicity - 0.6422 64.22%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3359 P21462 Formyl peptide receptor 1 96.92% 93.56%
CHEMBL2581 P07339 Cathepsin D 95.88% 98.95%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.22% 91.11%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 94.57% 95.56%
CHEMBL1255126 O15151 Protein Mdm4 94.44% 90.20%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 93.64% 96.09%
CHEMBL4101 P17612 cAMP-dependent protein kinase alpha-catalytic subunit 91.03% 82.86%
CHEMBL1907591 P30926 Neuronal acetylcholine receptor; alpha4/beta4 90.03% 100.00%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 89.57% 94.45%
CHEMBL3060 Q9Y345 Glycine transporter 2 89.50% 99.17%
CHEMBL221 P23219 Cyclooxygenase-1 86.83% 90.17%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 85.97% 96.00%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 85.36% 95.50%
CHEMBL2514 O95665 Neurotensin receptor 2 85.28% 100.00%
CHEMBL4227 P25090 Lipoxin A4 receptor 85.21% 100.00%
CHEMBL3401 O75469 Pregnane X receptor 84.00% 94.73%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 83.77% 99.15%
CHEMBL1795139 Q8IU80 Transmembrane protease serine 6 81.95% 98.33%
CHEMBL2095164 P49354 Geranylgeranyl transferase type I 81.25% 92.80%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 129039
LOTUS LTS0140485
wikiData Q27131049