Chamaecydin

Details

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Internal ID ad0a110a-4e04-474e-9bf6-8916468e8b14
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Diterpenoids
IUPAC Name (1'R,4S,5'S,6aS,10aS)-1-hydroxy-7,7,10a-trimethyl-1',3-di(propan-2-yl)spiro[6a,8,9,10-tetrahydro-6H-acephenanthrylene-4,4'-bicyclo[3.1.0]hexane]-2,5-dione
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C30H40O3/c1-15(2)20-22-21-17(26(33)30(22)12-11-29(16(3)4)14-19(29)30)13-18-27(5,6)9-8-10-28(18,7)23(21)25(32)24(20)31/h15-16,18-19,32H,8-14H2,1-7H3/t18-,19-,28-,29+,30-/m0/s1
InChI Key CTGGVCKBMLNHNX-WLHXYQFRSA-N
Popularity 4 references in papers

Physical and Chemical Properties

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Molecular Formula C30H40O3
Molecular Weight 448.60 g/mol
Exact Mass 448.29774513 g/mol
Topological Polar Surface Area (TPSA) 54.40 Ų
XlogP 6.40
Atomic LogP (AlogP) 6.89
H-Bond Acceptor 3
H-Bond Donor 1
Rotatable Bonds 2

Synonyms

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DTXSID401336838
86746-82-9

2D Structure

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2D Structure of Chamaecydin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9959 99.59%
Caco-2 + 0.6342 63.42%
Blood Brain Barrier + 0.7750 77.50%
Human oral bioavailability - 0.5429 54.29%
Subcellular localzation Mitochondria 0.8296 82.96%
OATP2B1 inhibitior - 0.8606 86.06%
OATP1B1 inhibitior + 0.8732 87.32%
OATP1B3 inhibitior + 0.9529 95.29%
MATE1 inhibitior - 0.8600 86.00%
OCT2 inhibitior + 0.6250 62.50%
BSEP inhibitior - 0.4517 45.17%
P-glycoprotein inhibitior - 0.4894 48.94%
P-glycoprotein substrate - 0.6320 63.20%
CYP3A4 substrate + 0.6284 62.84%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8712 87.12%
CYP3A4 inhibition - 0.8570 85.70%
CYP2C9 inhibition - 0.7084 70.84%
CYP2C19 inhibition - 0.7620 76.20%
CYP2D6 inhibition - 0.9187 91.87%
CYP1A2 inhibition - 0.7072 70.72%
CYP2C8 inhibition - 0.6537 65.37%
CYP inhibitory promiscuity - 0.7349 73.49%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.5505 55.05%
Eye corrosion - 0.9926 99.26%
Eye irritation - 0.8772 87.72%
Skin irritation + 0.5963 59.63%
Skin corrosion - 0.9473 94.73%
Ames mutagenesis - 0.6200 62.00%
Human Ether-a-go-go-Related Gene inhibition - 0.5590 55.90%
Micronuclear - 0.7600 76.00%
Hepatotoxicity + 0.5375 53.75%
skin sensitisation + 0.4812 48.12%
Respiratory toxicity + 0.6333 63.33%
Reproductive toxicity + 0.8222 82.22%
Mitochondrial toxicity + 0.8875 88.75%
Nephrotoxicity + 0.6744 67.44%
Acute Oral Toxicity (c) III 0.6827 68.27%
Estrogen receptor binding + 0.7644 76.44%
Androgen receptor binding + 0.6097 60.97%
Thyroid receptor binding + 0.6022 60.22%
Glucocorticoid receptor binding + 0.8484 84.84%
Aromatase binding + 0.6366 63.66%
PPAR gamma + 0.7574 75.74%
Honey bee toxicity - 0.8203 82.03%
Biodegradation - 0.8750 87.50%
Crustacea aquatic toxicity - 0.5000 50.00%
Fish aquatic toxicity + 0.9975 99.75%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.76% 91.11%
CHEMBL2581 P07339 Cathepsin D 95.76% 98.95%
CHEMBL253 P34972 Cannabinoid CB2 receptor 94.82% 97.25%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 92.48% 95.56%
CHEMBL1937 Q92769 Histone deacetylase 2 92.28% 94.75%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 91.64% 94.45%
CHEMBL3137262 O60341 LSD1/CoREST complex 89.75% 97.09%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 87.93% 96.09%
CHEMBL1994 P08235 Mineralocorticoid receptor 86.53% 100.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 85.33% 95.89%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 85.04% 90.71%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 84.11% 82.69%
CHEMBL5697 Q9GZT9 Egl nine homolog 1 83.30% 93.40%
CHEMBL3359 P21462 Formyl peptide receptor 1 83.11% 93.56%
CHEMBL1806 P11388 DNA topoisomerase II alpha 80.62% 89.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Chamaecyparis obtusa
Cryptomeria japonica

Cross-Links

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PubChem 101637219
LOTUS LTS0258956
wikiData Q104402106