Chaiyaphumine B

Details

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Internal ID 204a691c-a0a6-41b0-b4f6-2e99df8014c5
Taxonomy Organic acids and derivatives > Peptidomimetics > Depsipeptides > Cyclic depsipeptides
IUPAC Name N-[(3R,6R,9S,10R,13S,16S)-6-benzyl-13-(1H-indol-3-ylmethyl)-3,10-dimethyl-2,5,8,12,15-pentaoxo-11-oxa-1,4,7,14-tetrazabicyclo[14.3.0]nonadecan-9-yl]butanamide
SMILES (Canonical) CCCC(=O)NC1C(OC(=O)C(NC(=O)C2CCCN2C(=O)C(NC(=O)C(NC1=O)CC3=CC=CC=C3)C)CC4=CNC5=CC=CC=C54)C
SMILES (Isomeric) CCCC(=O)N[C@H]1[C@H](OC(=O)[C@@H](NC(=O)[C@@H]2CCCN2C(=O)[C@H](NC(=O)[C@H](NC1=O)CC3=CC=CC=C3)C)CC4=CNC5=CC=CC=C54)C
InChI InChI=1S/C36H44N6O7/c1-4-11-30(43)41-31-22(3)49-36(48)28(19-24-20-37-26-15-9-8-14-25(24)26)40-33(45)29-16-10-17-42(29)35(47)21(2)38-32(44)27(39-34(31)46)18-23-12-6-5-7-13-23/h5-9,12-15,20-22,27-29,31,37H,4,10-11,16-19H2,1-3H3,(H,38,44)(H,39,46)(H,40,45)(H,41,43)/t21-,22-,27-,28+,29+,31+/m1/s1
InChI Key CBWGERMBARYLSR-GJQBDUKRSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C36H44N6O7
Molecular Weight 672.80 g/mol
Exact Mass 672.32714776 g/mol
Topological Polar Surface Area (TPSA) 179.00 Ų
XlogP 3.10
Atomic LogP (AlogP) 1.65
H-Bond Acceptor 7
H-Bond Donor 5
Rotatable Bonds 7

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Chaiyaphumine B

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7464 74.64%
Caco-2 - 0.8791 87.91%
Blood Brain Barrier - 0.8250 82.50%
Human oral bioavailability - 0.6429 64.29%
Subcellular localzation Mitochondria 0.3875 38.75%
OATP2B1 inhibitior - 0.5703 57.03%
OATP1B1 inhibitior + 0.8135 81.35%
OATP1B3 inhibitior + 0.9181 91.81%
MATE1 inhibitior - 0.7409 74.09%
OCT2 inhibitior - 0.8610 86.10%
BSEP inhibitior + 0.9876 98.76%
P-glycoprotein inhibitior + 0.8165 81.65%
P-glycoprotein substrate + 0.8306 83.06%
CYP3A4 substrate + 0.7001 70.01%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8320 83.20%
CYP3A4 inhibition + 0.5896 58.96%
CYP2C9 inhibition - 0.8488 84.88%
CYP2C19 inhibition - 0.7584 75.84%
CYP2D6 inhibition - 0.8624 86.24%
CYP1A2 inhibition - 0.8855 88.55%
CYP2C8 inhibition + 0.5825 58.25%
CYP inhibitory promiscuity - 0.5745 57.45%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.9400 94.00%
Carcinogenicity (trinary) Non-required 0.5799 57.99%
Eye corrosion - 0.9918 99.18%
Eye irritation - 0.9406 94.06%
Skin irritation - 0.8150 81.50%
Skin corrosion - 0.9424 94.24%
Ames mutagenesis - 0.6500 65.00%
Human Ether-a-go-go-Related Gene inhibition + 0.8048 80.48%
Micronuclear + 0.8200 82.00%
Hepatotoxicity + 0.5159 51.59%
skin sensitisation - 0.9063 90.63%
Respiratory toxicity + 0.8778 87.78%
Reproductive toxicity + 0.9222 92.22%
Mitochondrial toxicity + 0.9125 91.25%
Nephrotoxicity - 0.5937 59.37%
Acute Oral Toxicity (c) III 0.6499 64.99%
Estrogen receptor binding + 0.7676 76.76%
Androgen receptor binding - 0.5151 51.51%
Thyroid receptor binding + 0.5881 58.81%
Glucocorticoid receptor binding + 0.7247 72.47%
Aromatase binding - 0.5000 50.00%
PPAR gamma + 0.7938 79.38%
Honey bee toxicity - 0.8295 82.95%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity + 0.5800 58.00%
Fish aquatic toxicity + 0.9298 92.98%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 99.51% 98.95%
CHEMBL2693 Q9UIQ6 Cystinyl aminopeptidase 98.64% 97.64%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 97.72% 85.14%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.41% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.87% 96.09%
CHEMBL333 P08253 Matrix metalloproteinase-2 95.45% 96.31%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 95.04% 95.56%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 93.10% 99.23%
CHEMBL1907600 Q00535 Cyclin-dependent kinase 5/CDK5 activator 1 90.53% 93.03%
CHEMBL255 P29275 Adenosine A2b receptor 90.05% 98.59%
CHEMBL1902 P62942 FK506-binding protein 1A 87.96% 97.05%
CHEMBL5103 Q969S8 Histone deacetylase 10 87.89% 90.08%
CHEMBL1806 P11388 DNA topoisomerase II alpha 87.85% 89.00%
CHEMBL3137262 O60341 LSD1/CoREST complex 87.84% 97.09%
CHEMBL5608 Q16288 NT-3 growth factor receptor 86.71% 95.89%
CHEMBL3155 P34969 Serotonin 7 (5-HT7) receptor 86.71% 90.71%
CHEMBL5805 Q9NR97 Toll-like receptor 8 84.07% 96.25%
CHEMBL4644 P41968 Melanocortin receptor 3 84.01% 99.52%
CHEMBL2069156 Q14145 Kelch-like ECH-associated protein 1 83.03% 82.38%
CHEMBL4051 P13569 Cystic fibrosis transmembrane conductance regulator 82.66% 95.71%
CHEMBL221 P23219 Cyclooxygenase-1 81.64% 90.17%
CHEMBL2095172 P14867 GABA-A receptor; alpha-1/beta-2/gamma-2 81.37% 92.67%
CHEMBL3060 Q9Y345 Glycine transporter 2 80.38% 99.17%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 139586267
LOTUS LTS0157181
wikiData Q77502657