(2S,3R,4R,5R,6S)-2-[(2R,3R,4S,5S,6R)-2-[(1S,2S,3'S,4S,5'R,6R,6'R,7S,8R,9S,12S,13R,16S)-3',6'-dihydroxy-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-ene-6,2'-oxane]-16-yl]oxy-4-hydroxy-6-(hydroxymethyl)-5-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-3-yl]oxy-6-methyloxane-3,4,5-triol

Details

Top
Internal ID a913e03e-817c-4a0d-bd47-76da326709c8
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name (2S,3R,4R,5R,6S)-2-[(2R,3R,4S,5S,6R)-2-[(1S,2S,3'S,4S,5'R,6R,6'R,7S,8R,9S,12S,13R,16S)-3',6'-dihydroxy-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-ene-6,2'-oxane]-16-yl]oxy-4-hydroxy-6-(hydroxymethyl)-5-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-3-yl]oxy-6-methyloxane-3,4,5-triol
SMILES (Canonical) CC1CC(C2(C(C3C(O2)CC4C3(CCC5C4CC=C6C5(CCC(C6)OC7C(C(C(C(O7)CO)OC8C(C(C(CO8)O)O)O)O)OC9C(C(C(C(O9)C)O)O)O)C)C)C)OC1O)O
SMILES (Isomeric) C[C@@H]1C[C@@H]([C@@]2([C@H]([C@H]3[C@@H](O2)C[C@@H]4[C@@]3(CC[C@H]5[C@H]4CC=C6[C@@]5(CC[C@@H](C6)O[C@H]7[C@@H]([C@H]([C@@H]([C@H](O7)CO)O[C@H]8[C@@H]([C@H]([C@@H](CO8)O)O)O)O)O[C@H]9[C@@H]([C@@H]([C@H]([C@@H](O9)C)O)O)O)C)C)C)O[C@H]1O)O
InChI InChI=1S/C44H70O18/c1-17-12-28(47)44(62-38(17)54)18(2)29-26(61-44)14-24-22-7-6-20-13-21(8-10-42(20,4)23(22)9-11-43(24,29)5)57-41-37(60-40-34(52)32(50)30(48)19(3)56-40)35(53)36(27(15-45)58-41)59-39-33(51)31(49)25(46)16-55-39/h6,17-19,21-41,45-54H,7-16H2,1-5H3/t17-,18+,19+,21+,22-,23+,24+,25-,26+,27-,28+,29+,30+,31+,32-,33-,34-,35+,36-,37-,38-,39+,40+,41-,42+,43+,44-/m1/s1
InChI Key YJEDERNKWZNDRS-YDVBGJJBSA-N
Popularity 0 references in papers

Physical and Chemical Properties

Top
Molecular Formula C44H70O18
Molecular Weight 887.00 g/mol
Exact Mass 886.45621538 g/mol
Topological Polar Surface Area (TPSA) 276.00 Ų
XlogP -0.60
Atomic LogP (AlogP) -0.86
H-Bond Acceptor 18
H-Bond Donor 10
Rotatable Bonds 7

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of (2S,3R,4R,5R,6S)-2-[(2R,3R,4S,5S,6R)-2-[(1S,2S,3'S,4S,5'R,6R,6'R,7S,8R,9S,12S,13R,16S)-3',6'-dihydroxy-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-ene-6,2'-oxane]-16-yl]oxy-4-hydroxy-6-(hydroxymethyl)-5-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-3-yl]oxy-6-methyloxane-3,4,5-triol

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7571 75.71%
Caco-2 - 0.8893 88.93%
Blood Brain Barrier - 0.6750 67.50%
Human oral bioavailability - 0.7857 78.57%
Subcellular localzation Mitochondria 0.7376 73.76%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8839 88.39%
OATP1B3 inhibitior + 0.8994 89.94%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.5500 55.00%
BSEP inhibitior + 0.8941 89.41%
P-glycoprotein inhibitior + 0.7249 72.49%
P-glycoprotein substrate + 0.6435 64.35%
CYP3A4 substrate + 0.7552 75.52%
CYP2C9 substrate - 0.8046 80.46%
CYP2D6 substrate - 0.8297 82.97%
CYP3A4 inhibition - 0.9268 92.68%
CYP2C9 inhibition - 0.9182 91.82%
CYP2C19 inhibition - 0.9234 92.34%
CYP2D6 inhibition - 0.9343 93.43%
CYP1A2 inhibition - 0.9102 91.02%
CYP2C8 inhibition + 0.7691 76.91%
CYP inhibitory promiscuity - 0.9302 93.02%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.5116 51.16%
Eye corrosion - 0.9898 98.98%
Eye irritation - 0.9126 91.26%
Skin irritation + 0.4929 49.29%
Skin corrosion - 0.9426 94.26%
Ames mutagenesis - 0.8466 84.66%
Human Ether-a-go-go-Related Gene inhibition + 0.7688 76.88%
Micronuclear - 0.8700 87.00%
Hepatotoxicity - 0.9500 95.00%
skin sensitisation - 0.9214 92.14%
Respiratory toxicity + 0.7444 74.44%
Reproductive toxicity + 0.9222 92.22%
Mitochondrial toxicity + 0.5375 53.75%
Nephrotoxicity - 0.9322 93.22%
Acute Oral Toxicity (c) I 0.5904 59.04%
Estrogen receptor binding + 0.8367 83.67%
Androgen receptor binding + 0.7358 73.58%
Thyroid receptor binding - 0.5493 54.93%
Glucocorticoid receptor binding - 0.4822 48.22%
Aromatase binding + 0.6665 66.65%
PPAR gamma + 0.7296 72.96%
Honey bee toxicity - 0.5990 59.90%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity - 0.5000 50.00%
Fish aquatic toxicity + 0.9176 91.76%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.02% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.73% 96.09%
CHEMBL226 P30542 Adenosine A1 receptor 98.40% 95.93%
CHEMBL1994 P08235 Mineralocorticoid receptor 93.94% 100.00%
CHEMBL1914 P06276 Butyrylcholinesterase 93.75% 95.00%
CHEMBL3137262 O60341 LSD1/CoREST complex 93.65% 97.09%
CHEMBL1937 Q92769 Histone deacetylase 2 90.97% 94.75%
CHEMBL1806 P11388 DNA topoisomerase II alpha 90.45% 89.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 89.02% 86.33%
CHEMBL253 P34972 Cannabinoid CB2 receptor 88.57% 97.25%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 87.42% 95.89%
CHEMBL5608 Q16288 NT-3 growth factor receptor 87.12% 95.89%
CHEMBL218 P21554 Cannabinoid CB1 receptor 86.48% 96.61%
CHEMBL241 Q14432 Phosphodiesterase 3A 84.52% 92.94%
CHEMBL1871 P10275 Androgen Receptor 84.43% 96.43%
CHEMBL325 Q13547 Histone deacetylase 1 83.95% 95.92%
CHEMBL3713062 P10646 Tissue factor pathway inhibitor 83.94% 97.33%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 83.58% 94.45%
CHEMBL2581 P07339 Cathepsin D 83.56% 98.95%
CHEMBL3430907 Q96GD4 Aurora kinase B/Inner centromere protein 83.19% 97.50%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 82.67% 94.00%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 82.58% 89.05%
CHEMBL3714130 P46095 G-protein coupled receptor 6 82.38% 97.36%
CHEMBL5028 O14672 ADAM10 82.03% 97.50%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Solanum lasiocarpum

Cross-Links

Top
PubChem 163085568
LOTUS LTS0177417
wikiData Q105349206