Cedkathryn B

Details

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Internal ID 4ac6a2cd-5400-454e-b49e-6df4a70eebbb
Taxonomy Organoheterocyclic compounds > Lactones > Delta valerolactones
IUPAC Name (1S,2S,3'S,4R,6R,9S,10R)-10-(furan-3-yl)-2',2'-dimethyl-3'-[(2S)-2-methyl-5-oxofuran-2-yl]spiro[5,11-dioxatetracyclo[7.3.1.01,9.02,6]tridecane-4,5'-oxolane]-12-one
SMILES (Canonical) CC1(C(CC2(O1)CC3C(O2)CCC45C3(C4)C(=O)OC5C6=COC=C6)C7(C=CC(=O)O7)C)C
SMILES (Isomeric) C[C@]1(C=CC(=O)O1)[C@H]2C[C@@]3(C[C@@H]4[C@H](O3)CC[C@@]56[C@@]4(C5)C(=O)O[C@H]6C7=COC=C7)OC2(C)C
InChI InChI=1S/C25H28O7/c1-21(2)17(22(3)7-5-18(26)31-22)11-24(32-21)10-15-16(30-24)4-8-23-13-25(15,23)20(27)29-19(23)14-6-9-28-12-14/h5-7,9,12,15-17,19H,4,8,10-11,13H2,1-3H3/t15-,16-,17+,19+,22+,23-,24-,25-/m1/s1
InChI Key ZLKNSNBMQLJCPU-AROYWQBSSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C25H28O7
Molecular Weight 440.50 g/mol
Exact Mass 440.18350323 g/mol
Topological Polar Surface Area (TPSA) 84.20 Ų
XlogP 2.40
Atomic LogP (AlogP) 3.84
H-Bond Acceptor 7
H-Bond Donor 0
Rotatable Bonds 2

Synonyms

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(1S,2S,3'S,4R,6R,9S,10R)-10-(Furan-3-yl)-2',2'-dimethyl-3'-[(2S)-2-methyl-5-oxofuran-2-yl]spiro[5,11-dioxatetracyclo[7.3.1.01,9.02,6]tridecane-4,5'-oxolane]-12-one

2D Structure

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2D Structure of Cedkathryn B

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9881 98.81%
Caco-2 - 0.6905 69.05%
Blood Brain Barrier + 0.7000 70.00%
Human oral bioavailability - 0.5714 57.14%
Subcellular localzation Mitochondria 0.7870 78.70%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.7426 74.26%
OATP1B3 inhibitior + 0.9139 91.39%
MATE1 inhibitior - 0.9200 92.00%
OCT2 inhibitior - 0.8250 82.50%
BSEP inhibitior + 0.7590 75.90%
P-glycoprotein inhibitior + 0.6447 64.47%
P-glycoprotein substrate - 0.5290 52.90%
CYP3A4 substrate + 0.6888 68.88%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8759 87.59%
CYP3A4 inhibition + 0.5472 54.72%
CYP2C9 inhibition - 0.8451 84.51%
CYP2C19 inhibition - 0.7952 79.52%
CYP2D6 inhibition - 0.9420 94.20%
CYP1A2 inhibition - 0.8354 83.54%
CYP2C8 inhibition + 0.6622 66.22%
CYP inhibitory promiscuity - 0.8823 88.23%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.5374 53.74%
Eye corrosion - 0.9874 98.74%
Eye irritation - 0.8975 89.75%
Skin irritation - 0.6821 68.21%
Skin corrosion - 0.8435 84.35%
Ames mutagenesis - 0.6470 64.70%
Human Ether-a-go-go-Related Gene inhibition + 0.8158 81.58%
Micronuclear - 0.7200 72.00%
Hepatotoxicity + 0.5125 51.25%
skin sensitisation - 0.8070 80.70%
Respiratory toxicity + 0.7444 74.44%
Reproductive toxicity + 0.7556 75.56%
Mitochondrial toxicity + 0.6125 61.25%
Nephrotoxicity + 0.7318 73.18%
Acute Oral Toxicity (c) III 0.3964 39.64%
Estrogen receptor binding + 0.8965 89.65%
Androgen receptor binding + 0.7546 75.46%
Thyroid receptor binding + 0.6767 67.67%
Glucocorticoid receptor binding + 0.8357 83.57%
Aromatase binding + 0.8052 80.52%
PPAR gamma + 0.6582 65.82%
Honey bee toxicity - 0.8584 85.84%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity + 0.6100 61.00%
Fish aquatic toxicity + 0.9944 99.44%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.03% 91.11%
CHEMBL3137262 O60341 LSD1/CoREST complex 92.19% 97.09%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 91.42% 94.45%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 89.83% 99.23%
CHEMBL1994 P08235 Mineralocorticoid receptor 88.31% 100.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 88.23% 89.00%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 86.67% 94.00%
CHEMBL3038469 P24941 CDK2/Cyclin A 86.66% 91.38%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 83.92% 96.09%
CHEMBL2039 P27338 Monoamine oxidase B 83.88% 92.51%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 82.75% 96.38%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 82.20% 95.56%
CHEMBL2094127 P06493 Cyclin-dependent kinase 1/cyclin B 81.82% 96.00%
CHEMBL2492 P36544 Neuronal acetylcholine receptor protein alpha-7 subunit 81.67% 88.42%
CHEMBL216 P11229 Muscarinic acetylcholine receptor M1 80.47% 94.23%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 80.25% 97.14%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Cedrelopsis gracilis

Cross-Links

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PubChem 11464841
LOTUS LTS0013512
wikiData Q105378955