(2R,3R,4S,5S,6R)-2-[(2S)-4-[(1R,2S,4S,8S,9S,12S,13R,16S,18S,19S)-19-[(2R,3R,4S,5R,6R)-3,5-dihydroxy-6-methyl-4-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-2-yl]oxy-16-hydroxy-7,9,13-trimethyl-5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-6-en-6-yl]-2-methylbutoxy]-6-(hydroxymethyl)oxane-3,4,5-triol

Details

Top
Internal ID 94e9745f-c1b4-4cf9-861f-88ee09141e80
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name (2R,3R,4S,5S,6R)-2-[(2S)-4-[(1R,2S,4S,8S,9S,12S,13R,16S,18S,19S)-19-[(2R,3R,4S,5R,6R)-3,5-dihydroxy-6-methyl-4-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-2-yl]oxy-16-hydroxy-7,9,13-trimethyl-5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-6-en-6-yl]-2-methylbutoxy]-6-(hydroxymethyl)oxane-3,4,5-triol
SMILES (Canonical) CC1C(C(C(C(O1)OC2CC3C(CCC4(C3CC5C4C(=C(O5)CCC(C)COC6C(C(C(C(O6)CO)O)O)O)C)C)C7(C2CC(CC7)O)C)O)OC8C(C(C(CO8)O)O)O)O
SMILES (Isomeric) C[C@@H]1[C@H]([C@@H]([C@H]([C@@H](O1)O[C@H]2C[C@@H]3[C@H](CC[C@]4([C@H]3C[C@H]5[C@@H]4C(=C(O5)CC[C@H](C)CO[C@H]6[C@@H]([C@H]([C@@H]([C@H](O6)CO)O)O)O)C)C)[C@@]7([C@@H]2C[C@H](CC7)O)C)O)O[C@H]8[C@@H]([C@H]([C@@H](CO8)O)O)O)O
InChI InChI=1S/C44H72O17/c1-18(16-55-40-37(53)35(51)34(50)30(15-45)60-40)6-7-27-19(2)31-29(58-27)14-24-22-13-28(25-12-21(46)8-10-43(25,4)23(22)9-11-44(24,31)5)59-42-38(54)39(32(48)20(3)57-42)61-41-36(52)33(49)26(47)17-56-41/h18,20-26,28-42,45-54H,6-17H2,1-5H3/t18-,20+,21-,22+,23-,24-,25+,26+,28-,29-,30+,31-,32+,33-,34+,35-,36+,37+,38+,39-,40+,41-,42-,43+,44-/m0/s1
InChI Key XWJMDDSYQJISEQ-DYASFAPUSA-N
Popularity 0 references in papers

Physical and Chemical Properties

Top
Molecular Formula C44H72O17
Molecular Weight 873.00 g/mol
Exact Mass 872.47695082 g/mol
Topological Polar Surface Area (TPSA) 267.00 Ų
XlogP 0.20
Atomic LogP (AlogP) -0.19
H-Bond Acceptor 17
H-Bond Donor 10
Rotatable Bonds 11

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of (2R,3R,4S,5S,6R)-2-[(2S)-4-[(1R,2S,4S,8S,9S,12S,13R,16S,18S,19S)-19-[(2R,3R,4S,5R,6R)-3,5-dihydroxy-6-methyl-4-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-2-yl]oxy-16-hydroxy-7,9,13-trimethyl-5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-6-en-6-yl]-2-methylbutoxy]-6-(hydroxymethyl)oxane-3,4,5-triol

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6879 68.79%
Caco-2 - 0.8867 88.67%
Blood Brain Barrier - 0.6500 65.00%
Human oral bioavailability - 0.7714 77.14%
Subcellular localzation Mitochondria 0.6925 69.25%
OATP2B1 inhibitior - 0.8734 87.34%
OATP1B1 inhibitior + 0.8364 83.64%
OATP1B3 inhibitior + 0.9297 92.97%
MATE1 inhibitior - 0.9412 94.12%
OCT2 inhibitior - 0.5500 55.00%
BSEP inhibitior + 0.6483 64.83%
P-glycoprotein inhibitior + 0.7350 73.50%
P-glycoprotein substrate + 0.6969 69.69%
CYP3A4 substrate + 0.7489 74.89%
CYP2C9 substrate - 0.8018 80.18%
CYP2D6 substrate - 0.8244 82.44%
CYP3A4 inhibition - 0.9320 93.20%
CYP2C9 inhibition - 0.9177 91.77%
CYP2C19 inhibition - 0.9166 91.66%
CYP2D6 inhibition - 0.9363 93.63%
CYP1A2 inhibition - 0.9075 90.75%
CYP2C8 inhibition + 0.7263 72.63%
CYP inhibitory promiscuity - 0.9284 92.84%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.5732 57.32%
Eye corrosion - 0.9908 99.08%
Eye irritation - 0.9134 91.34%
Skin irritation - 0.5215 52.15%
Skin corrosion - 0.9467 94.67%
Ames mutagenesis - 0.6715 67.15%
Human Ether-a-go-go-Related Gene inhibition + 0.8372 83.72%
Micronuclear - 0.8900 89.00%
Hepatotoxicity - 0.7570 75.70%
skin sensitisation - 0.9208 92.08%
Respiratory toxicity + 0.6444 64.44%
Reproductive toxicity + 0.8556 85.56%
Mitochondrial toxicity + 0.5250 52.50%
Nephrotoxicity - 0.9696 96.96%
Acute Oral Toxicity (c) I 0.8055 80.55%
Estrogen receptor binding + 0.8157 81.57%
Androgen receptor binding + 0.7087 70.87%
Thyroid receptor binding - 0.5677 56.77%
Glucocorticoid receptor binding + 0.6208 62.08%
Aromatase binding + 0.6677 66.77%
PPAR gamma + 0.7353 73.53%
Honey bee toxicity - 0.6125 61.25%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.5600 56.00%
Fish aquatic toxicity + 0.9074 90.74%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.96% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.78% 96.09%
CHEMBL226 P30542 Adenosine A1 receptor 95.15% 95.93%
CHEMBL1907605 P24864 Cyclin-dependent kinase 2/cyclin E1 94.39% 92.88%
CHEMBL253 P34972 Cannabinoid CB2 receptor 93.36% 97.25%
CHEMBL3137262 O60341 LSD1/CoREST complex 92.47% 97.09%
CHEMBL218 P21554 Cannabinoid CB1 receptor 91.13% 96.61%
CHEMBL1937 Q92769 Histone deacetylase 2 89.60% 94.75%
CHEMBL2842 P42345 Serine/threonine-protein kinase mTOR 88.95% 92.78%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 88.91% 95.89%
CHEMBL1293249 Q13887 Kruppel-like factor 5 88.77% 86.33%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 88.63% 100.00%
CHEMBL4005 P42336 PI3-kinase p110-alpha subunit 88.29% 97.47%
CHEMBL1806 P11388 DNA topoisomerase II alpha 86.12% 89.00%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 85.82% 94.45%
CHEMBL5608 Q16288 NT-3 growth factor receptor 85.72% 95.89%
CHEMBL1994 P08235 Mineralocorticoid receptor 85.54% 100.00%
CHEMBL3004 P33527 Multidrug resistance-associated protein 1 85.36% 96.37%
CHEMBL3713062 P10646 Tissue factor pathway inhibitor 85.31% 97.33%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 84.84% 96.47%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 84.81% 92.86%
CHEMBL6136 O60341 Lysine-specific histone demethylase 1 83.84% 95.58%
CHEMBL4581 P52732 Kinesin-like protein 1 83.67% 93.18%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 82.50% 90.71%
CHEMBL204 P00734 Thrombin 82.38% 96.01%
CHEMBL237 P41145 Kappa opioid receptor 82.02% 98.10%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 81.55% 95.83%
CHEMBL2095194 P08709 Coagulation factor VII/tissue factor 81.46% 99.17%
CHEMBL3145 P42338 PI3-kinase p110-beta subunit 81.26% 98.75%
CHEMBL233 P35372 Mu opioid receptor 81.07% 97.93%
CHEMBL4618 P09960 Leukotriene A4 hydrolase 80.67% 97.86%
CHEMBL5028 O14672 ADAM10 80.61% 97.50%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Solanum torvum

Cross-Links

Top
PubChem 163028193
LOTUS LTS0229061
wikiData Q105343437