(2R,3S,4S,5R,6R)-2-(hydroxymethyl)-6-[(3S,5S,6E,10R)-3,10,11-trihydroxy-3,7,11-trimethyldodeca-1,6-dien-5-yl]oxyoxane-3,4,5-triol

Details

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Internal ID c4b262ef-a05c-4a2a-8125-26663635a9b1
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides
IUPAC Name (2R,3S,4S,5R,6R)-2-(hydroxymethyl)-6-[(3S,5S,6E,10R)-3,10,11-trihydroxy-3,7,11-trimethyldodeca-1,6-dien-5-yl]oxyoxane-3,4,5-triol
SMILES (Canonical) CC(=CC(CC(C)(C=C)O)OC1C(C(C(C(O1)CO)O)O)O)CCC(C(C)(C)O)O
SMILES (Isomeric) C/C(=C\[C@H](C[C@@](C)(C=C)O)O[C@H]1[C@@H]([C@H]([C@@H]([C@H](O1)CO)O)O)O)/CC[C@H](C(C)(C)O)O
InChI InChI=1S/C21H38O9/c1-6-21(5,28)10-13(9-12(2)7-8-15(23)20(3,4)27)29-19-18(26)17(25)16(24)14(11-22)30-19/h6,9,13-19,22-28H,1,7-8,10-11H2,2-5H3/b12-9+/t13-,14-,15-,16-,17+,18-,19-,21-/m1/s1
InChI Key AXBUFJCSFBHIIY-PYIBUYJLSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C21H38O9
Molecular Weight 434.50 g/mol
Exact Mass 434.25158279 g/mol
Topological Polar Surface Area (TPSA) 160.00 Ų
XlogP -0.40
Atomic LogP (AlogP) -0.64
H-Bond Acceptor 9
H-Bond Donor 7
Rotatable Bonds 11

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2R,3S,4S,5R,6R)-2-(hydroxymethyl)-6-[(3S,5S,6E,10R)-3,10,11-trihydroxy-3,7,11-trimethyldodeca-1,6-dien-5-yl]oxyoxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.4678 46.78%
Caco-2 - 0.7869 78.69%
Blood Brain Barrier - 0.5250 52.50%
Human oral bioavailability - 0.6429 64.29%
Subcellular localzation Mitochondria 0.7735 77.35%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8671 86.71%
OATP1B3 inhibitior + 0.8627 86.27%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.6000 60.00%
BSEP inhibitior - 0.8510 85.10%
P-glycoprotein inhibitior - 0.7523 75.23%
P-glycoprotein substrate - 0.7803 78.03%
CYP3A4 substrate + 0.6322 63.22%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8469 84.69%
CYP3A4 inhibition - 0.7952 79.52%
CYP2C9 inhibition - 0.7399 73.99%
CYP2C19 inhibition - 0.7935 79.35%
CYP2D6 inhibition - 0.9348 93.48%
CYP1A2 inhibition - 0.8196 81.96%
CYP2C8 inhibition - 0.6164 61.64%
CYP inhibitory promiscuity - 0.9419 94.19%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9300 93.00%
Carcinogenicity (trinary) Non-required 0.7179 71.79%
Eye corrosion - 0.9873 98.73%
Eye irritation - 0.9572 95.72%
Skin irritation - 0.6892 68.92%
Skin corrosion - 0.9476 94.76%
Ames mutagenesis - 0.6954 69.54%
Human Ether-a-go-go-Related Gene inhibition + 0.6984 69.84%
Micronuclear - 0.8800 88.00%
Hepatotoxicity - 0.6292 62.92%
skin sensitisation - 0.7870 78.70%
Respiratory toxicity - 0.7111 71.11%
Reproductive toxicity + 0.5778 57.78%
Mitochondrial toxicity - 0.5625 56.25%
Nephrotoxicity - 0.6688 66.88%
Acute Oral Toxicity (c) III 0.6853 68.53%
Estrogen receptor binding + 0.5682 56.82%
Androgen receptor binding - 0.5186 51.86%
Thyroid receptor binding + 0.6445 64.45%
Glucocorticoid receptor binding + 0.5375 53.75%
Aromatase binding + 0.6464 64.64%
PPAR gamma + 0.5462 54.62%
Honey bee toxicity - 0.6357 63.57%
Biodegradation - 0.6000 60.00%
Crustacea aquatic toxicity - 0.8200 82.00%
Fish aquatic toxicity + 0.8526 85.26%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 94.84% 98.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.27% 96.09%
CHEMBL3401 O75469 Pregnane X receptor 94.10% 94.73%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 93.28% 91.11%
CHEMBL3060 Q9Y345 Glycine transporter 2 93.09% 99.17%
CHEMBL253 P34972 Cannabinoid CB2 receptor 90.95% 97.25%
CHEMBL215 P09917 Arachidonate 5-lipoxygenase 88.10% 92.68%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 87.00% 85.14%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 86.64% 95.89%
CHEMBL3359 P21462 Formyl peptide receptor 1 85.05% 93.56%
CHEMBL5966 P55899 IgG receptor FcRn large subunit p51 84.53% 90.93%
CHEMBL1293316 Q9HBX9 Relaxin receptor 1 83.65% 82.50%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 83.62% 96.47%
CHEMBL218 P21554 Cannabinoid CB1 receptor 83.59% 96.61%
CHEMBL4657 Q6V1X1 Dipeptidyl peptidase VIII 83.38% 97.21%
CHEMBL3714130 P46095 G-protein coupled receptor 6 82.57% 97.36%
CHEMBL4005 P42336 PI3-kinase p110-alpha subunit 82.15% 97.47%
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 80.30% 97.29%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Saussurea triangulata

Cross-Links

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PubChem 162853311
LOTUS LTS0019872
wikiData Q104920417