Calophyllumin A

Details

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Internal ID c96f149b-3aac-41ec-9d15-4894b70219a1
Taxonomy Organoheterocyclic compounds > Benzodioxanes > Phenylbenzodioxanes > Phenylbenzo-1,4-dioxanes
IUPAC Name (2R,3R)-8,10-dihydroxy-3-(4-hydroxy-3,5-dimethoxyphenyl)-2-(hydroxymethyl)-5-methoxy-2,3-dihydro-[1,4]dioxino[2,3-c]xanthen-7-one
SMILES (Canonical) COC1=CC(=CC(=C1O)OC)C2C(OC3=C4C(=CC(=C3O2)OC)C(=O)C5=C(C=C(C=C5O4)O)O)CO
SMILES (Isomeric) COC1=CC(=CC(=C1O)OC)[C@@H]2[C@H](OC3=C4C(=CC(=C3O2)OC)C(=O)C5=C(C=C(C=C5O4)O)O)CO
InChI InChI=1S/C25H22O11/c1-31-15-4-10(5-16(32-2)21(15)30)22-18(9-26)35-25-23-12(8-17(33-3)24(25)36-22)20(29)19-13(28)6-11(27)7-14(19)34-23/h4-8,18,22,26-28,30H,9H2,1-3H3/t18-,22-/m1/s1
InChI Key LPJRGKHCMHTXJG-XMSQKQJNSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C25H22O11
Molecular Weight 498.40 g/mol
Exact Mass 498.11621151 g/mol
Topological Polar Surface Area (TPSA) 153.00 Ų
XlogP 3.00
Atomic LogP (AlogP) 2.96
H-Bond Acceptor 11
H-Bond Donor 4
Rotatable Bonds 5

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Calophyllumin A

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8893 88.93%
Caco-2 - 0.7347 73.47%
Blood Brain Barrier - 0.7750 77.50%
Human oral bioavailability - 0.6000 60.00%
Subcellular localzation Mitochondria 0.6699 66.99%
OATP2B1 inhibitior - 0.8584 85.84%
OATP1B1 inhibitior + 0.7919 79.19%
OATP1B3 inhibitior - 0.3164 31.64%
MATE1 inhibitior - 0.6200 62.00%
OCT2 inhibitior - 0.9250 92.50%
BSEP inhibitior + 0.8337 83.37%
P-glycoprotein inhibitior + 0.8538 85.38%
P-glycoprotein substrate - 0.5627 56.27%
CYP3A4 substrate + 0.6286 62.86%
CYP2C9 substrate - 0.6235 62.35%
CYP2D6 substrate - 0.8293 82.93%
CYP3A4 inhibition - 0.5928 59.28%
CYP2C9 inhibition - 0.6736 67.36%
CYP2C19 inhibition - 0.7375 73.75%
CYP2D6 inhibition - 0.9170 91.70%
CYP1A2 inhibition - 0.8181 81.81%
CYP2C8 inhibition + 0.6465 64.65%
CYP inhibitory promiscuity + 0.6513 65.13%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.7217 72.17%
Eye corrosion - 0.9863 98.63%
Eye irritation - 0.8385 83.85%
Skin irritation - 0.8350 83.50%
Skin corrosion - 0.9670 96.70%
Ames mutagenesis + 0.6018 60.18%
Human Ether-a-go-go-Related Gene inhibition + 0.7418 74.18%
Micronuclear + 0.6559 65.59%
Hepatotoxicity - 0.5125 51.25%
skin sensitisation - 0.8982 89.82%
Respiratory toxicity + 0.7667 76.67%
Reproductive toxicity + 0.7444 74.44%
Mitochondrial toxicity - 0.5250 52.50%
Nephrotoxicity - 0.7094 70.94%
Acute Oral Toxicity (c) III 0.6807 68.07%
Estrogen receptor binding + 0.8714 87.14%
Androgen receptor binding + 0.7629 76.29%
Thyroid receptor binding + 0.5547 55.47%
Glucocorticoid receptor binding + 0.8571 85.71%
Aromatase binding + 0.5922 59.22%
PPAR gamma + 0.6764 67.64%
Honey bee toxicity - 0.7209 72.09%
Biodegradation - 0.9000 90.00%
Crustacea aquatic toxicity - 0.6400 64.00%
Fish aquatic toxicity - 0.4517 45.17%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.38% 91.11%
CHEMBL1806 P11388 DNA topoisomerase II alpha 95.28% 89.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 94.15% 95.56%
CHEMBL2581 P07339 Cathepsin D 93.28% 98.95%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 92.14% 94.00%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 90.88% 86.92%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 90.79% 96.09%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 89.69% 85.14%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 89.56% 99.23%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 89.19% 94.45%
CHEMBL3060 Q9Y345 Glycine transporter 2 88.81% 99.17%
CHEMBL1293249 Q13887 Kruppel-like factor 5 88.10% 86.33%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 86.52% 92.62%
CHEMBL3194 P02766 Transthyretin 84.43% 90.71%
CHEMBL3137262 O60341 LSD1/CoREST complex 83.79% 97.09%
CHEMBL3401 O75469 Pregnane X receptor 82.92% 94.73%
CHEMBL3713062 P10646 Tissue factor pathway inhibitor 81.62% 97.33%
CHEMBL241 Q14432 Phosphodiesterase 3A 80.88% 92.94%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Calophyllum inophyllum

Cross-Links

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PubChem 101989185
LOTUS LTS0044221
wikiData Q105155205