(2R,3R,4S,5R,6R)-2-[[(2R,3R,4S,5R,6R)-3,4-dihydroxy-6-[(1R,2S,4S,5'R,6R,7S,8R,9S,12S,13S,16S,18R)-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-16-yl]oxy-5-[(2S,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-2-yl]methoxy]-6-(hydroxymethyl)oxane-3,4,5-triol

Details

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Internal ID 7703ba1d-a4c4-44ff-9a8e-a12c65f47b7a
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name (2R,3R,4S,5R,6R)-2-[[(2R,3R,4S,5R,6R)-3,4-dihydroxy-6-[(1R,2S,4S,5'R,6R,7S,8R,9S,12S,13S,16S,18R)-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-16-yl]oxy-5-[(2S,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-2-yl]methoxy]-6-(hydroxymethyl)oxane-3,4,5-triol
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C45H74O18/c1-19-7-12-45(57-17-19)20(2)30-26(63-45)14-25-23-6-5-21-13-22(8-10-43(21,3)24(23)9-11-44(25,30)4)58-42-39(62-41-38(55)35(52)32(49)28(16-47)60-41)36(53)33(50)29(61-42)18-56-40-37(54)34(51)31(48)27(15-46)59-40/h19-42,46-55H,5-18H2,1-4H3/t19-,20+,21-,22+,23-,24+,25+,26+,27-,28-,29-,30+,31+,32+,33+,34+,35+,36+,37-,38-,39-,40-,41+,42-,43+,44+,45-/m1/s1
InChI Key UTXFFSIHMAHBLN-BFWUUNFQSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C45H74O18
Molecular Weight 903.10 g/mol
Exact Mass 902.48751551 g/mol
Topological Polar Surface Area (TPSA) 276.00 Ų
XlogP 1.20
Atomic LogP (AlogP) -0.73
H-Bond Acceptor 18
H-Bond Donor 10
Rotatable Bonds 9

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2R,3R,4S,5R,6R)-2-[[(2R,3R,4S,5R,6R)-3,4-dihydroxy-6-[(1R,2S,4S,5'R,6R,7S,8R,9S,12S,13S,16S,18R)-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-16-yl]oxy-5-[(2S,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-2-yl]methoxy]-6-(hydroxymethyl)oxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5917 59.17%
Caco-2 - 0.8843 88.43%
Blood Brain Barrier - 0.6750 67.50%
Human oral bioavailability - 0.7714 77.14%
Subcellular localzation Mitochondria 0.6898 68.98%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9177 91.77%
OATP1B3 inhibitior + 0.9448 94.48%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior + 0.5750 57.50%
BSEP inhibitior - 0.5000 50.00%
P-glycoprotein inhibitior + 0.7224 72.24%
P-glycoprotein substrate - 0.6656 66.56%
CYP3A4 substrate + 0.7449 74.49%
CYP2C9 substrate - 0.8054 80.54%
CYP2D6 substrate - 0.8164 81.64%
CYP3A4 inhibition - 0.9611 96.11%
CYP2C9 inhibition - 0.9091 90.91%
CYP2C19 inhibition - 0.8819 88.19%
CYP2D6 inhibition - 0.9566 95.66%
CYP1A2 inhibition - 0.9089 90.89%
CYP2C8 inhibition + 0.6400 64.00%
CYP inhibitory promiscuity - 0.9291 92.91%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.6271 62.71%
Eye corrosion - 0.9909 99.09%
Eye irritation - 0.9103 91.03%
Skin irritation - 0.7119 71.19%
Skin corrosion - 0.9532 95.32%
Ames mutagenesis - 0.7854 78.54%
Human Ether-a-go-go-Related Gene inhibition + 0.7665 76.65%
Micronuclear - 0.9200 92.00%
Hepatotoxicity - 0.9125 91.25%
skin sensitisation - 0.9466 94.66%
Respiratory toxicity + 0.7556 75.56%
Reproductive toxicity + 0.6222 62.22%
Mitochondrial toxicity - 0.5250 52.50%
Nephrotoxicity - 0.7196 71.96%
Acute Oral Toxicity (c) I 0.7761 77.61%
Estrogen receptor binding + 0.8163 81.63%
Androgen receptor binding + 0.6814 68.14%
Thyroid receptor binding - 0.5828 58.28%
Glucocorticoid receptor binding - 0.4740 47.40%
Aromatase binding + 0.6533 65.33%
PPAR gamma + 0.7077 70.77%
Honey bee toxicity - 0.5491 54.91%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity - 0.5200 52.00%
Fish aquatic toxicity + 0.8210 82.10%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.10% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.03% 91.11%
CHEMBL3137262 O60341 LSD1/CoREST complex 96.17% 97.09%
CHEMBL233 P35372 Mu opioid receptor 94.63% 97.93%
CHEMBL237 P41145 Kappa opioid receptor 93.52% 98.10%
CHEMBL218 P21554 Cannabinoid CB1 receptor 93.03% 96.61%
CHEMBL253 P34972 Cannabinoid CB2 receptor 92.69% 97.25%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 92.12% 95.50%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 91.95% 89.05%
CHEMBL1994 P08235 Mineralocorticoid receptor 91.69% 100.00%
CHEMBL226 P30542 Adenosine A1 receptor 91.21% 95.93%
CHEMBL5255 O00206 Toll-like receptor 4 90.48% 92.50%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 90.13% 96.21%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 89.80% 94.45%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 89.17% 92.86%
CHEMBL4618 P09960 Leukotriene A4 hydrolase 87.29% 97.86%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 86.75% 96.95%
CHEMBL6136 O60341 Lysine-specific histone demethylase 1 86.20% 95.58%
CHEMBL241 Q14432 Phosphodiesterase 3A 85.04% 92.94%
CHEMBL3430907 Q96GD4 Aurora kinase B/Inner centromere protein 84.76% 97.50%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 84.64% 100.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 83.70% 95.89%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 83.60% 96.77%
CHEMBL5888 Q99558 Mitogen-activated protein kinase kinase kinase 14 83.33% 100.00%
CHEMBL1871 P10275 Androgen Receptor 83.16% 96.43%
CHEMBL2996 Q05655 Protein kinase C delta 83.00% 97.79%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 82.91% 95.89%
CHEMBL1806 P11388 DNA topoisomerase II alpha 81.96% 89.00%
CHEMBL2072 P35499 Sodium channel protein type IV alpha subunit 81.67% 92.32%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 81.62% 86.92%
CHEMBL2107 P61073 C-X-C chemokine receptor type 4 81.44% 93.10%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 80.89% 93.04%
CHEMBL1163125 O60885 Bromodomain-containing protein 4 80.85% 97.31%
CHEMBL2094128 P24941 Cyclin-dependent kinase 2/cyclin A 80.69% 97.25%
CHEMBL206 P03372 Estrogen receptor alpha 80.17% 97.64%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 80.00% 96.38%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Smilax aristolochiifolia

Cross-Links

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PubChem 163040471
LOTUS LTS0204394
wikiData Q105279154