[(3R,8R,9S,10R,13R,14R,16S,17S)-17-acetyl-3-[(2S,3S,4R,5R,6S)-4-hydroxy-6-(hydroxymethyl)-3,5-bis[[(2R,3S,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxy]oxan-2-yl]oxy-10,13-dimethyl-2,3,4,7,8,9,11,12,14,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-16-yl] (4R)-4-methyl-5-[(2S,3S,4R,5R,6S)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxypentanoate

Details

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Internal ID fbce2c61-19e1-4bd4-b2cc-afb2d5b4d9e9
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name [(3R,8R,9S,10R,13R,14R,16S,17S)-17-acetyl-3-[(2S,3S,4R,5R,6S)-4-hydroxy-6-(hydroxymethyl)-3,5-bis[[(2R,3S,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxy]oxan-2-yl]oxy-10,13-dimethyl-2,3,4,7,8,9,11,12,14,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-16-yl] (4R)-4-methyl-5-[(2S,3S,4R,5R,6S)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxypentanoate
SMILES (Canonical) CC1C(C(C(C(O1)OC2C(OC(C(C2O)OC3C(C(C(C(O3)C)O)O)O)OC4CCC5(C6CCC7(C(C6CC=C5C4)CC(C7C(=O)C)OC(=O)CCC(C)COC8C(C(C(C(O8)CO)O)O)O)C)C)CO)O)O)O
SMILES (Isomeric) C[C@H]1[C@@H]([C@H]([C@@H]([C@H](O1)O[C@H]2[C@@H](O[C@@H]([C@H]([C@@H]2O)O[C@@H]3[C@H]([C@@H]([C@H]([C@@H](O3)C)O)O)O)O[C@@H]4CC[C@@]5([C@H]6CC[C@@]7([C@@H]([C@H]6CC=C5C4)C[C@@H]([C@H]7C(=O)C)OC(=O)CC[C@@H](C)CO[C@@H]8[C@H]([C@@H]([C@H]([C@@H](O8)CO)O)O)O)C)C)CO)O)O)O
InChI InChI=1S/C51H82O23/c1-20(19-66-46-40(62)39(61)36(58)30(17-52)71-46)7-10-32(55)70-29-16-28-26-9-8-24-15-25(11-13-50(24,5)27(26)12-14-51(28,6)33(29)21(2)54)69-49-45(74-48-42(64)38(60)35(57)23(4)68-48)43(65)44(31(18-53)72-49)73-47-41(63)37(59)34(56)22(3)67-47/h8,20,22-23,25-31,33-49,52-53,56-65H,7,9-19H2,1-6H3/t20-,22+,23+,25-,26+,27+,28-,29+,30+,31+,33-,34+,35+,36+,37-,38-,39-,40+,41+,42+,43-,44+,45+,46+,47-,48-,49+,50+,51-/m1/s1
InChI Key OJBSJPFDQZUALV-NZOLDEDUSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C51H82O23
Molecular Weight 1063.20 g/mol
Exact Mass 1062.52468886 g/mol
Topological Polar Surface Area (TPSA) 360.00 Ų
XlogP -2.10
Atomic LogP (AlogP) -2.20
H-Bond Acceptor 23
H-Bond Donor 12
Rotatable Bonds 16

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of [(3R,8R,9S,10R,13R,14R,16S,17S)-17-acetyl-3-[(2S,3S,4R,5R,6S)-4-hydroxy-6-(hydroxymethyl)-3,5-bis[[(2R,3S,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxy]oxan-2-yl]oxy-10,13-dimethyl-2,3,4,7,8,9,11,12,14,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-16-yl] (4R)-4-methyl-5-[(2S,3S,4R,5R,6S)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxypentanoate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7135 71.35%
Caco-2 - 0.8783 87.83%
Blood Brain Barrier - 0.5250 52.50%
Human oral bioavailability - 0.8143 81.43%
Subcellular localzation Mitochondria 0.8629 86.29%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8625 86.25%
OATP1B3 inhibitior + 0.7884 78.84%
MATE1 inhibitior - 0.9812 98.12%
OCT2 inhibitior - 0.5298 52.98%
BSEP inhibitior + 0.9114 91.14%
P-glycoprotein inhibitior + 0.7456 74.56%
P-glycoprotein substrate + 0.6709 67.09%
CYP3A4 substrate + 0.7550 75.50%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8833 88.33%
CYP3A4 inhibition - 0.9295 92.95%
CYP2C9 inhibition - 0.9215 92.15%
CYP2C19 inhibition - 0.9385 93.85%
CYP2D6 inhibition - 0.9550 95.50%
CYP1A2 inhibition - 0.8971 89.71%
CYP2C8 inhibition + 0.7022 70.22%
CYP inhibitory promiscuity - 0.9438 94.38%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.6009 60.09%
Eye corrosion - 0.9899 98.99%
Eye irritation - 0.9035 90.35%
Skin irritation + 0.4910 49.10%
Skin corrosion - 0.9419 94.19%
Ames mutagenesis - 0.8237 82.37%
Human Ether-a-go-go-Related Gene inhibition + 0.7931 79.31%
Micronuclear - 0.7900 79.00%
Hepatotoxicity - 0.8375 83.75%
skin sensitisation - 0.9349 93.49%
Respiratory toxicity + 0.7222 72.22%
Reproductive toxicity + 0.9111 91.11%
Mitochondrial toxicity + 0.5375 53.75%
Nephrotoxicity - 0.8837 88.37%
Acute Oral Toxicity (c) III 0.5730 57.30%
Estrogen receptor binding + 0.8503 85.03%
Androgen receptor binding + 0.7150 71.50%
Thyroid receptor binding + 0.5870 58.70%
Glucocorticoid receptor binding + 0.7798 77.98%
Aromatase binding + 0.6912 69.12%
PPAR gamma + 0.8159 81.59%
Honey bee toxicity - 0.6210 62.10%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.5555 55.55%
Fish aquatic toxicity + 0.9668 96.68%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 99.45% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.14% 91.11%
CHEMBL2581 P07339 Cathepsin D 94.07% 98.95%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 92.54% 95.89%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 92.53% 89.05%
CHEMBL1806 P11388 DNA topoisomerase II alpha 92.13% 89.00%
CHEMBL5255 O00206 Toll-like receptor 4 91.79% 92.50%
CHEMBL253 P34972 Cannabinoid CB2 receptor 91.73% 97.25%
CHEMBL226 P30542 Adenosine A1 receptor 91.61% 95.93%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 91.41% 94.45%
CHEMBL1994 P08235 Mineralocorticoid receptor 90.66% 100.00%
CHEMBL3137262 O60341 LSD1/CoREST complex 90.47% 97.09%
CHEMBL3359 P21462 Formyl peptide receptor 1 88.44% 93.56%
CHEMBL5608 Q16288 NT-3 growth factor receptor 85.53% 95.89%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 85.02% 96.00%
CHEMBL3060 Q9Y345 Glycine transporter 2 84.98% 99.17%
CHEMBL4227 P25090 Lipoxin A4 receptor 84.66% 100.00%
CHEMBL340 P08684 Cytochrome P450 3A4 83.37% 91.19%
CHEMBL1293249 Q13887 Kruppel-like factor 5 82.89% 86.33%
CHEMBL1821 P08173 Muscarinic acetylcholine receptor M4 82.13% 94.08%
CHEMBL5028 O14672 ADAM10 81.73% 97.50%
CHEMBL2140 P48775 Tryptophan 2,3-dioxygenase 81.00% 98.46%
CHEMBL216 P11229 Muscarinic acetylcholine receptor M1 80.46% 94.23%
CHEMBL1937 Q92769 Histone deacetylase 2 80.25% 94.75%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Dioscorea spongiosa

Cross-Links

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PubChem 162907395
LOTUS LTS0052164
wikiData Q105192971