6-[(3S,8S,9S,10R,13R,14R,17S)-3-[(2R,3S,4S,5S,6S)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-2-yl]oxy-11-hydroxy-4,4,9,13,14-pentamethyl-2,3,7,8,10,11,12,15,16,17-decahydro-1H-cyclopenta[a]phenanthren-17-yl]-2-methyl-2-[(2S,4S,5S,6S)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyheptan-3-one

Details

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Internal ID 6be13dba-df66-4111-bdf9-cc63c45fdad3
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins > Cucurbitacin glycosides
IUPAC Name 6-[(3S,8S,9S,10R,13R,14R,17S)-3-[(2R,3S,4S,5S,6S)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-2-yl]oxy-11-hydroxy-4,4,9,13,14-pentamethyl-2,3,7,8,10,11,12,15,16,17-decahydro-1H-cyclopenta[a]phenanthren-17-yl]-2-methyl-2-[(2S,4S,5S,6S)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyheptan-3-one
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C48H80O19/c1-21(9-13-29(52)45(4,5)67-42-39(61)36(58)33(55)26(19-50)63-42)22-15-16-46(6)28-12-10-23-24(48(28,8)30(53)17-47(22,46)7)11-14-31(44(23,2)3)65-43-40(37(59)34(56)27(20-51)64-43)66-41-38(60)35(57)32(54)25(18-49)62-41/h10,21-22,24-28,30-43,49-51,53-61H,9,11-20H2,1-8H3/t21?,22-,24+,25+,26-,27-,28-,30?,31-,32+,33+,34+,35-,36-,37-,38+,39?,40-,41-,42-,43-,46+,47+,48+/m0/s1
InChI Key PDZZUWXWWCGPHP-GEHAVMMQSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C48H80O19
Molecular Weight 961.10 g/mol
Exact Mass 960.52938032 g/mol
Topological Polar Surface Area (TPSA) 315.00 Ų
XlogP 0.50
Atomic LogP (AlogP) -0.85
H-Bond Acceptor 19
H-Bond Donor 12
Rotatable Bonds 14

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of 6-[(3S,8S,9S,10R,13R,14R,17S)-3-[(2R,3S,4S,5S,6S)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-2-yl]oxy-11-hydroxy-4,4,9,13,14-pentamethyl-2,3,7,8,10,11,12,15,16,17-decahydro-1H-cyclopenta[a]phenanthren-17-yl]-2-methyl-2-[(2S,4S,5S,6S)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyheptan-3-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8258 82.58%
Caco-2 - 0.8847 88.47%
Blood Brain Barrier - 0.6000 60.00%
Human oral bioavailability - 0.8000 80.00%
Subcellular localzation Mitochondria 0.8432 84.32%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8396 83.96%
OATP1B3 inhibitior - 0.3515 35.15%
MATE1 inhibitior - 0.9812 98.12%
OCT2 inhibitior - 0.6526 65.26%
BSEP inhibitior + 0.8259 82.59%
P-glycoprotein inhibitior + 0.7519 75.19%
P-glycoprotein substrate + 0.5055 50.55%
CYP3A4 substrate + 0.7304 73.04%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8581 85.81%
CYP3A4 inhibition - 0.9446 94.46%
CYP2C9 inhibition - 0.8769 87.69%
CYP2C19 inhibition - 0.9253 92.53%
CYP2D6 inhibition - 0.9396 93.96%
CYP1A2 inhibition - 0.9147 91.47%
CYP2C8 inhibition + 0.6635 66.35%
CYP inhibitory promiscuity - 0.9524 95.24%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.6051 60.51%
Eye corrosion - 0.9903 99.03%
Eye irritation - 0.9046 90.46%
Skin irritation - 0.5396 53.96%
Skin corrosion - 0.9439 94.39%
Ames mutagenesis - 0.7574 75.74%
Human Ether-a-go-go-Related Gene inhibition + 0.8279 82.79%
Micronuclear - 0.8600 86.00%
Hepatotoxicity - 0.7370 73.70%
skin sensitisation - 0.9029 90.29%
Respiratory toxicity - 0.5000 50.00%
Reproductive toxicity + 0.9444 94.44%
Mitochondrial toxicity - 0.5750 57.50%
Nephrotoxicity - 0.8143 81.43%
Acute Oral Toxicity (c) III 0.6642 66.42%
Estrogen receptor binding + 0.8177 81.77%
Androgen receptor binding + 0.7697 76.97%
Thyroid receptor binding - 0.5088 50.88%
Glucocorticoid receptor binding + 0.7685 76.85%
Aromatase binding + 0.6564 65.64%
PPAR gamma + 0.8038 80.38%
Honey bee toxicity - 0.6722 67.22%
Biodegradation - 0.7000 70.00%
Crustacea aquatic toxicity - 0.5400 54.00%
Fish aquatic toxicity + 0.9477 94.77%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL253 P34972 Cannabinoid CB2 receptor 98.71% 97.25%
CHEMBL218 P21554 Cannabinoid CB1 receptor 98.70% 96.61%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.96% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.51% 91.11%
CHEMBL2581 P07339 Cathepsin D 94.41% 98.95%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 94.18% 94.45%
CHEMBL3137262 O60341 LSD1/CoREST complex 92.09% 97.09%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 91.97% 96.21%
CHEMBL3359 P21462 Formyl peptide receptor 1 91.00% 93.56%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 89.64% 95.56%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 86.98% 97.14%
CHEMBL4227 P25090 Lipoxin A4 receptor 86.83% 100.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 84.76% 86.33%
CHEMBL5608 Q16288 NT-3 growth factor receptor 84.71% 95.89%
CHEMBL1806 P11388 DNA topoisomerase II alpha 84.44% 89.00%
CHEMBL5028 O14672 ADAM10 83.25% 97.50%
CHEMBL5255 O00206 Toll-like receptor 4 83.19% 92.50%
CHEMBL1994 P08235 Mineralocorticoid receptor 82.87% 100.00%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 82.85% 92.62%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 82.20% 95.89%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 82.07% 94.33%
CHEMBL4051 P13569 Cystic fibrosis transmembrane conductance regulator 81.97% 95.71%
CHEMBL2094135 Q96BI3 Gamma-secretase 81.97% 98.05%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 81.81% 93.04%
CHEMBL3714130 P46095 G-protein coupled receptor 6 80.90% 97.36%
CHEMBL3060 Q9Y345 Glycine transporter 2 80.51% 99.17%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 80.14% 91.07%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 101921696
LOTUS LTS0191710
wikiData Q105372671