methyl (1S)-7-(hydroxymethyl)-1-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-1,4a,5,6-tetrahydrocyclopenta[c]pyran-4-carboxylate

Details

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Internal ID 3207e997-e206-429e-8f71-3f58ca348ca4
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Glycosyl compounds > O-glycosyl compounds
IUPAC Name methyl (1S)-7-(hydroxymethyl)-1-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-1,4a,5,6-tetrahydrocyclopenta[c]pyran-4-carboxylate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C17H24O10/c1-24-15(23)9-6-25-16(11-7(4-18)2-3-8(9)11)27-17-14(22)13(21)12(20)10(5-19)26-17/h6,8,10,12-14,16-22H,2-5H2,1H3/t8?,10-,12-,13+,14-,16+,17+/m1/s1
InChI Key VGLLGNISLBPZNL-KPZBCUPXSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C17H24O10
Molecular Weight 388.40 g/mol
Exact Mass 388.13694696 g/mol
Topological Polar Surface Area (TPSA) 155.00 Ų
XlogP -2.60
Atomic LogP (AlogP) -2.08
H-Bond Acceptor 10
H-Bond Donor 5
Rotatable Bonds 5

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of methyl (1S)-7-(hydroxymethyl)-1-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-1,4a,5,6-tetrahydrocyclopenta[c]pyran-4-carboxylate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.5849 58.49%
Caco-2 - 0.8574 85.74%
Blood Brain Barrier - 0.6142 61.42%
Human oral bioavailability - 0.7857 78.57%
Subcellular localzation Mitochondria 0.8314 83.14%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8081 80.81%
OATP1B3 inhibitior + 0.9449 94.49%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.7750 77.50%
BSEP inhibitior - 0.9159 91.59%
P-glycoprotein inhibitior - 0.8957 89.57%
P-glycoprotein substrate - 0.8015 80.15%
CYP3A4 substrate + 0.6434 64.34%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8572 85.72%
CYP3A4 inhibition - 0.9781 97.81%
CYP2C9 inhibition - 0.9280 92.80%
CYP2C19 inhibition - 0.8464 84.64%
CYP2D6 inhibition - 0.8815 88.15%
CYP1A2 inhibition - 0.8144 81.44%
CYP2C8 inhibition - 0.5633 56.33%
CYP inhibitory promiscuity - 0.8621 86.21%
UGT catelyzed - 0.5638 56.38%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.6508 65.08%
Eye corrosion - 0.9840 98.40%
Eye irritation - 0.9396 93.96%
Skin irritation - 0.7807 78.07%
Skin corrosion - 0.9552 95.52%
Ames mutagenesis - 0.5070 50.70%
Human Ether-a-go-go-Related Gene inhibition - 0.5333 53.33%
Micronuclear - 0.8700 87.00%
Hepatotoxicity - 0.7500 75.00%
skin sensitisation - 0.8816 88.16%
Respiratory toxicity - 0.5444 54.44%
Reproductive toxicity + 0.8111 81.11%
Mitochondrial toxicity + 0.5250 52.50%
Nephrotoxicity - 0.6435 64.35%
Acute Oral Toxicity (c) III 0.5005 50.05%
Estrogen receptor binding + 0.6505 65.05%
Androgen receptor binding - 0.4833 48.33%
Thyroid receptor binding - 0.5882 58.82%
Glucocorticoid receptor binding - 0.5273 52.73%
Aromatase binding - 0.5330 53.30%
PPAR gamma - 0.5000 50.00%
Honey bee toxicity - 0.8605 86.05%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity - 0.7800 78.00%
Fish aquatic toxicity + 0.6598 65.98%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.76% 96.09%
CHEMBL4040 P28482 MAP kinase ERK2 96.42% 83.82%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 94.10% 91.11%
CHEMBL3060 Q9Y345 Glycine transporter 2 91.56% 99.17%
CHEMBL2581 P07339 Cathepsin D 91.35% 98.95%
CHEMBL3137262 O60341 LSD1/CoREST complex 90.06% 97.09%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 85.65% 86.92%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 84.95% 95.89%
CHEMBL5255 O00206 Toll-like receptor 4 83.70% 92.50%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 83.67% 94.33%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 83.20% 85.14%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 82.97% 96.00%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 82.20% 92.62%
CHEMBL5608 Q16288 NT-3 growth factor receptor 82.17% 95.89%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 82.10% 95.83%
CHEMBL3401 O75469 Pregnane X receptor 82.07% 94.73%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Plantago ovata

Cross-Links

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PubChem 22297603
LOTUS LTS0209700
wikiData Q105285868