5-[(1S,2R)-1,2-dihydroxy-4-oxocyclohexyl]-3-[(2S,5R,6R)-6-[(Z)-4,6-dimethyloct-2-en-2-yl]-5-methyloxan-2-yl]-4-hydroxy-1-methylpyridin-2-one

Details

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Internal ID 9cde7f16-ac1f-44bc-98fe-3259c770c677
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides
IUPAC Name 5-[(1S,2R)-1,2-dihydroxy-4-oxocyclohexyl]-3-[(2S,5R,6R)-6-[(Z)-4,6-dimethyloct-2-en-2-yl]-5-methyloxan-2-yl]-4-hydroxy-1-methylpyridin-2-one
SMILES (Canonical) CCC(C)CC(C)C=C(C)C1C(CCC(O1)C2=C(C(=CN(C2=O)C)C3(CCC(=O)CC3O)O)O)C
SMILES (Isomeric) CCC(C)CC(C)/C=C(/C)\[C@H]1[C@@H](CC[C@H](O1)C2=C(C(=CN(C2=O)C)[C@]3(CCC(=O)C[C@H]3O)O)O)C
InChI InChI=1S/C28H43NO6/c1-7-16(2)12-17(3)13-19(5)26-18(4)8-9-22(35-26)24-25(32)21(15-29(6)27(24)33)28(34)11-10-20(30)14-23(28)31/h13,15-18,22-23,26,31-32,34H,7-12,14H2,1-6H3/b19-13-/t16?,17?,18-,22+,23-,26-,28+/m1/s1
InChI Key CYNJYGDSSURTLH-SZWNMPLSSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C28H43NO6
Molecular Weight 489.60 g/mol
Exact Mass 489.30903809 g/mol
Topological Polar Surface Area (TPSA) 107.00 Ų
XlogP 2.60
Atomic LogP (AlogP) 4.27
H-Bond Acceptor 7
H-Bond Donor 3
Rotatable Bonds 7

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of 5-[(1S,2R)-1,2-dihydroxy-4-oxocyclohexyl]-3-[(2S,5R,6R)-6-[(Z)-4,6-dimethyloct-2-en-2-yl]-5-methyloxan-2-yl]-4-hydroxy-1-methylpyridin-2-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8243 82.43%
Caco-2 - 0.6980 69.80%
Blood Brain Barrier - 0.5500 55.00%
Human oral bioavailability - 0.6429 64.29%
Subcellular localzation Mitochondria 0.5268 52.68%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8257 82.57%
OATP1B3 inhibitior + 0.9229 92.29%
MATE1 inhibitior - 0.8000 80.00%
OCT2 inhibitior - 0.8072 80.72%
BSEP inhibitior + 0.6871 68.71%
P-glycoprotein inhibitior + 0.6044 60.44%
P-glycoprotein substrate + 0.6858 68.58%
CYP3A4 substrate + 0.6888 68.88%
CYP2C9 substrate + 0.8050 80.50%
CYP2D6 substrate - 0.8723 87.23%
CYP3A4 inhibition - 0.6878 68.78%
CYP2C9 inhibition - 0.7853 78.53%
CYP2C19 inhibition - 0.7230 72.30%
CYP2D6 inhibition - 0.8872 88.72%
CYP1A2 inhibition - 0.6930 69.30%
CYP2C8 inhibition - 0.5688 56.88%
CYP inhibitory promiscuity - 0.9005 90.05%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9100 91.00%
Carcinogenicity (trinary) Non-required 0.5672 56.72%
Eye corrosion - 0.9863 98.63%
Eye irritation - 0.9329 93.29%
Skin irritation - 0.7690 76.90%
Skin corrosion - 0.9190 91.90%
Ames mutagenesis + 0.5293 52.93%
Human Ether-a-go-go-Related Gene inhibition - 0.6450 64.50%
Micronuclear + 0.7300 73.00%
Hepatotoxicity + 0.5125 51.25%
skin sensitisation - 0.8448 84.48%
Respiratory toxicity + 0.8556 85.56%
Reproductive toxicity + 0.8889 88.89%
Mitochondrial toxicity + 0.9125 91.25%
Nephrotoxicity - 0.9112 91.12%
Acute Oral Toxicity (c) III 0.4537 45.37%
Estrogen receptor binding + 0.6655 66.55%
Androgen receptor binding + 0.7046 70.46%
Thyroid receptor binding + 0.5702 57.02%
Glucocorticoid receptor binding + 0.7292 72.92%
Aromatase binding + 0.6192 61.92%
PPAR gamma + 0.6593 65.93%
Honey bee toxicity - 0.8219 82.19%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity - 0.5300 53.00%
Fish aquatic toxicity + 0.9360 93.60%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 99.08% 98.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.83% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.88% 91.11%
CHEMBL253 P34972 Cannabinoid CB2 receptor 95.78% 97.25%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 94.95% 95.56%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 93.38% 90.71%
CHEMBL5697 Q9GZT9 Egl nine homolog 1 91.79% 93.40%
CHEMBL1806 P11388 DNA topoisomerase II alpha 91.74% 89.00%
CHEMBL255 P29275 Adenosine A2b receptor 90.06% 98.59%
CHEMBL2553 Q15418 Ribosomal protein S6 kinase alpha 1 89.27% 85.11%
CHEMBL226 P30542 Adenosine A1 receptor 88.98% 95.93%
CHEMBL1293249 Q13887 Kruppel-like factor 5 88.56% 86.33%
CHEMBL3359 P21462 Formyl peptide receptor 1 88.38% 93.56%
CHEMBL5608 Q16288 NT-3 growth factor receptor 87.17% 95.89%
CHEMBL3137262 O60341 LSD1/CoREST complex 86.64% 97.09%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 86.50% 96.38%
CHEMBL1994 P08235 Mineralocorticoid receptor 85.85% 100.00%
CHEMBL4040 P28482 MAP kinase ERK2 85.08% 83.82%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 84.75% 95.89%
CHEMBL2140 P48775 Tryptophan 2,3-dioxygenase 84.35% 98.46%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 82.57% 100.00%
CHEMBL4208 P20618 Proteasome component C5 81.54% 90.00%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 81.28% 93.00%
CHEMBL2413 P32246 C-C chemokine receptor type 1 80.21% 89.50%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 80.19% 97.14%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 102179404
LOTUS LTS0268826
wikiData Q105103423