Agavoside B

Details

Top
Internal ID 9c81ffd7-5698-4a46-932a-c46b423e0892
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name (1R,2S,4S,5'R,6R,7S,8R,9S,12S,13S,16S,18S)-16-[(2R,3R,4R,5R,6R)-3,4-dihydroxy-6-(hydroxymethyl)-5-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-2-yl]oxy-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-10-one
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C39H62O14/c1-17-7-10-39(48-16-17)18(2)28-24(53-39)12-23-21-6-5-19-11-20(8-9-37(19,3)22(21)13-27(42)38(23,28)4)49-35-33(47)31(45)34(26(15-41)51-35)52-36-32(46)30(44)29(43)25(14-40)50-36/h17-26,28-36,40-41,43-47H,5-16H2,1-4H3/t17-,18+,19+,20+,21-,22+,23+,24+,25-,26-,28+,29-,30+,31-,32-,33-,34+,35-,36+,37+,38-,39-/m1/s1
InChI Key YEKZYRCPUZIPAI-FKPXPTAZSA-N
Popularity 7 references in papers

Physical and Chemical Properties

Top
Molecular Formula C39H62O14
Molecular Weight 754.90 g/mol
Exact Mass 754.41395665 g/mol
Topological Polar Surface Area (TPSA) 214.00 Ų
XlogP 1.10
Atomic LogP (AlogP) 0.62
H-Bond Acceptor 14
H-Bond Donor 7
Rotatable Bonds 6

Synonyms

Top
AKOS040750193

2D Structure

Top
2D Structure of Agavoside B

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5000 50.00%
Caco-2 - 0.8870 88.70%
Blood Brain Barrier - 0.7000 70.00%
Human oral bioavailability - 0.7571 75.71%
Subcellular localzation Mitochondria 0.7795 77.95%
OATP2B1 inhibitior - 0.8684 86.84%
OATP1B1 inhibitior + 0.8805 88.05%
OATP1B3 inhibitior + 0.9395 93.95%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.5500 55.00%
BSEP inhibitior - 0.6666 66.66%
P-glycoprotein inhibitior + 0.7137 71.37%
P-glycoprotein substrate - 0.5961 59.61%
CYP3A4 substrate + 0.7336 73.36%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8483 84.83%
CYP3A4 inhibition - 0.9505 95.05%
CYP2C9 inhibition - 0.9148 91.48%
CYP2C19 inhibition - 0.8948 89.48%
CYP2D6 inhibition - 0.9589 95.89%
CYP1A2 inhibition - 0.9134 91.34%
CYP2C8 inhibition + 0.5445 54.45%
CYP inhibitory promiscuity - 0.9439 94.39%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.6468 64.68%
Eye corrosion - 0.9914 99.14%
Eye irritation - 0.9213 92.13%
Skin irritation - 0.6781 67.81%
Skin corrosion - 0.9501 95.01%
Ames mutagenesis - 0.8224 82.24%
Human Ether-a-go-go-Related Gene inhibition + 0.7262 72.62%
Micronuclear - 0.9200 92.00%
Hepatotoxicity - 0.8625 86.25%
skin sensitisation - 0.9458 94.58%
Respiratory toxicity + 0.8333 83.33%
Reproductive toxicity + 0.7000 70.00%
Mitochondrial toxicity - 0.5125 51.25%
Nephrotoxicity - 0.5962 59.62%
Acute Oral Toxicity (c) I 0.7157 71.57%
Estrogen receptor binding + 0.7793 77.93%
Androgen receptor binding + 0.7164 71.64%
Thyroid receptor binding - 0.6338 63.38%
Glucocorticoid receptor binding + 0.5416 54.16%
Aromatase binding + 0.6445 64.45%
PPAR gamma + 0.6596 65.96%
Honey bee toxicity - 0.5420 54.20%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity + 0.5100 51.00%
Fish aquatic toxicity + 0.8713 87.13%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.74% 91.11%
CHEMBL3137262 O60341 LSD1/CoREST complex 95.56% 97.09%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.31% 96.09%
CHEMBL1994 P08235 Mineralocorticoid receptor 91.33% 100.00%
CHEMBL5255 O00206 Toll-like receptor 4 88.29% 92.50%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 87.17% 94.45%
CHEMBL1293249 Q13887 Kruppel-like factor 5 85.78% 86.33%
CHEMBL237 P41145 Kappa opioid receptor 85.69% 98.10%
CHEMBL241 Q14432 Phosphodiesterase 3A 84.44% 92.94%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 83.74% 95.50%
CHEMBL253 P34972 Cannabinoid CB2 receptor 83.69% 97.25%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 81.66% 100.00%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 81.21% 93.04%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 81.18% 96.21%
CHEMBL1806 P11388 DNA topoisomerase II alpha 81.13% 89.00%
CHEMBL3430907 Q96GD4 Aurora kinase B/Inner centromere protein 80.75% 97.50%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Disporopsis pernyi
Tribulus terrestris

Cross-Links

Top
PubChem 101713741
LOTUS LTS0210797
wikiData Q104399268