methyl (1S,12R,14S,18S)-15-ethylidene-12-[(1'S,2S,7'R,8'S,9'S)-9'-ethyl-5-methoxy-3-oxospiro[1H-indole-2,6'-3-azatricyclo[5.3.1.03,8]undecane]-6-yl]-17-methyl-10,17-diazatetracyclo[12.3.1.03,11.04,9]octadeca-3(11),4,6,8-tetraene-18-carboxylate

Details

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Internal ID 425dadaf-1159-45eb-9bfc-69808107f128
Taxonomy Alkaloids and derivatives > Vobasan alkaloids
IUPAC Name methyl (1S,12R,14S,18S)-15-ethylidene-12-[(1'S,2S,7'R,8'S,9'S)-9'-ethyl-5-methoxy-3-oxospiro[1H-indole-2,6'-3-azatricyclo[5.3.1.03,8]undecane]-6-yl]-17-methyl-10,17-diazatetracyclo[12.3.1.03,11.04,9]octadeca-3(11),4,6,8-tetraene-18-carboxylate
SMILES (Canonical) CCC1CC2CC3C1N(C2)CCC34C(=O)C5=C(N4)C=C(C(=C5)OC)C6CC7C(C(CC8=C6NC9=CC=CC=C89)N(CC7=CC)C)C(=O)OC
SMILES (Isomeric) CC[C@H]1C[C@H]2C[C@@H]3[C@H]1N(C2)CC[C@@]34C(=O)C5=C(N4)C=C(C(=C5)OC)[C@H]6C[C@H]7[C@@H]([C@H](CC8=C6NC9=CC=CC=C89)N(CC7=CC)C)C(=O)OC
InChI InChI=1S/C41H50N4O4/c1-6-23-14-22-15-31-38(23)45(20-22)13-12-41(31)39(46)30-19-35(48-4)27(17-33(30)43-41)28-16-26-24(7-2)21-44(3)34(36(26)40(47)49-5)18-29-25-10-8-9-11-32(25)42-37(28)29/h7-11,17,19,22-23,26,28,31,34,36,38,42-43H,6,12-16,18,20-21H2,1-5H3/t22-,23-,26+,28+,31+,34-,36-,38-,41-/m0/s1
InChI Key VNPNTCIULDUSTQ-HVILNZTPSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C41H50N4O4
Molecular Weight 662.90 g/mol
Exact Mass 662.38320609 g/mol
Topological Polar Surface Area (TPSA) 86.90 Ų
XlogP 6.00
Atomic LogP (AlogP) 6.41
H-Bond Acceptor 7
H-Bond Donor 2
Rotatable Bonds 4

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of methyl (1S,12R,14S,18S)-15-ethylidene-12-[(1'S,2S,7'R,8'S,9'S)-9'-ethyl-5-methoxy-3-oxospiro[1H-indole-2,6'-3-azatricyclo[5.3.1.03,8]undecane]-6-yl]-17-methyl-10,17-diazatetracyclo[12.3.1.03,11.04,9]octadeca-3(11),4,6,8-tetraene-18-carboxylate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9706 97.06%
Caco-2 - 0.8085 80.85%
Blood Brain Barrier - 0.5500 55.00%
Human oral bioavailability - 0.6714 67.14%
Subcellular localzation Mitochondria 0.6582 65.82%
OATP2B1 inhibitior - 0.5653 56.53%
OATP1B1 inhibitior + 0.8195 81.95%
OATP1B3 inhibitior + 0.9183 91.83%
MATE1 inhibitior - 0.6219 62.19%
OCT2 inhibitior - 0.8500 85.00%
BSEP inhibitior + 0.9969 99.69%
P-glycoprotein inhibitior + 0.8669 86.69%
P-glycoprotein substrate + 0.8783 87.83%
CYP3A4 substrate + 0.7614 76.14%
CYP2C9 substrate - 0.5373 53.73%
CYP2D6 substrate - 0.7678 76.78%
CYP3A4 inhibition + 0.5635 56.35%
CYP2C9 inhibition - 0.6756 67.56%
CYP2C19 inhibition - 0.7240 72.40%
CYP2D6 inhibition - 0.8029 80.29%
CYP1A2 inhibition - 0.6818 68.18%
CYP2C8 inhibition + 0.7761 77.61%
CYP inhibitory promiscuity + 0.5485 54.85%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.5659 56.59%
Eye corrosion - 0.9882 98.82%
Eye irritation - 0.9341 93.41%
Skin irritation - 0.7771 77.71%
Skin corrosion - 0.9386 93.86%
Ames mutagenesis - 0.5900 59.00%
Human Ether-a-go-go-Related Gene inhibition + 0.8479 84.79%
Micronuclear + 0.7300 73.00%
Hepatotoxicity - 0.6323 63.23%
skin sensitisation - 0.8760 87.60%
Respiratory toxicity + 0.9556 95.56%
Reproductive toxicity + 0.9444 94.44%
Mitochondrial toxicity + 0.9500 95.00%
Nephrotoxicity - 0.6501 65.01%
Acute Oral Toxicity (c) III 0.6315 63.15%
Estrogen receptor binding + 0.8628 86.28%
Androgen receptor binding + 0.7589 75.89%
Thyroid receptor binding + 0.5871 58.71%
Glucocorticoid receptor binding + 0.8188 81.88%
Aromatase binding + 0.6706 67.06%
PPAR gamma + 0.7729 77.29%
Honey bee toxicity - 0.6554 65.54%
Biodegradation - 0.8750 87.50%
Crustacea aquatic toxicity - 0.5000 50.00%
Fish aquatic toxicity + 0.9956 99.56%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 99.81% 96.09%
CHEMBL253 P34972 Cannabinoid CB2 receptor 99.33% 97.25%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 98.79% 85.14%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 98.59% 95.56%
CHEMBL228 P31645 Serotonin transporter 98.21% 95.51%
CHEMBL2581 P07339 Cathepsin D 97.45% 98.95%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.42% 91.11%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 94.31% 82.69%
CHEMBL2535 P11166 Glucose transporter 94.19% 98.75%
CHEMBL3137262 O60341 LSD1/CoREST complex 93.88% 97.09%
CHEMBL255 P29275 Adenosine A2b receptor 92.52% 98.59%
CHEMBL1806 P11388 DNA topoisomerase II alpha 91.36% 89.00%
CHEMBL222 P23975 Norepinephrine transporter 89.27% 96.06%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 89.19% 94.45%
CHEMBL1907 P15144 Aminopeptidase N 88.10% 93.31%
CHEMBL1293249 Q13887 Kruppel-like factor 5 86.72% 86.33%
CHEMBL4208 P20618 Proteasome component C5 86.10% 90.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 85.99% 95.89%
CHEMBL4895 P30530 Tyrosine-protein kinase receptor UFO 85.76% 90.95%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 85.61% 97.14%
CHEMBL217 P14416 Dopamine D2 receptor 83.80% 95.62%
CHEMBL225 P28335 Serotonin 2c (5-HT2c) receptor 83.64% 89.62%
CHEMBL2095172 P14867 GABA-A receptor; alpha-1/beta-2/gamma-2 83.42% 92.67%
CHEMBL238 Q01959 Dopamine transporter 83.34% 95.88%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 82.43% 95.83%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 81.75% 93.00%
CHEMBL4227 P25090 Lipoxin A4 receptor 81.52% 100.00%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 81.41% 96.95%
CHEMBL1255126 O15151 Protein Mdm4 80.70% 90.20%
CHEMBL221 P23219 Cyclooxygenase-1 80.08% 90.17%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Tabernaemontana corymbosa

Cross-Links

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PubChem 163066305
LOTUS LTS0027295
wikiData Q105289836