(2R,3R,4S,5R,6R)-2-[[(1S,3R,6S,8R,10S,11S,12S,14S,15R,16R)-10,14-dihydroxy-15-[(2R,5R)-5-hydroxy-6-methyl-6-[(2S,3R,4R,5R)-3,4,5-trihydroxyoxan-2-yl]oxyheptan-2-yl]-7,7,12,16-tetramethyl-6-pentacyclo[9.7.0.01,3.03,8.012,16]octadecanyl]oxy]-6-(hydroxymethyl)oxane-3,4,5-triol

Details

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Internal ID 0a41ec1d-29df-4e1c-b889-25de9fa51495
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins > Cucurbitacin glycosides
IUPAC Name (2R,3R,4S,5R,6R)-2-[[(1S,3R,6S,8R,10S,11S,12S,14S,15R,16R)-10,14-dihydroxy-15-[(2R,5R)-5-hydroxy-6-methyl-6-[(2S,3R,4R,5R)-3,4,5-trihydroxyoxan-2-yl]oxyheptan-2-yl]-7,7,12,16-tetramethyl-6-pentacyclo[9.7.0.01,3.03,8.012,16]octadecanyl]oxy]-6-(hydroxymethyl)oxane-3,4,5-triol
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C41H70O14/c1-19(8-9-25(46)37(4,5)55-34-31(50)28(47)22(45)17-52-34)27-21(44)15-39(7)33-20(43)14-24-36(2,3)26(54-35-32(51)30(49)29(48)23(16-42)53-35)10-11-40(24)18-41(33,40)13-12-38(27,39)6/h19-35,42-51H,8-18H2,1-7H3/t19-,20+,21+,22-,23-,24+,25-,26+,27+,28-,29+,30+,31-,32-,33+,34+,35+,38-,39+,40-,41+/m1/s1
InChI Key BHRNXASDOAEKSN-HGKWOHTCSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C41H70O14
Molecular Weight 787.00 g/mol
Exact Mass 786.47655690 g/mol
Topological Polar Surface Area (TPSA) 239.00 Ų
XlogP 1.50
Atomic LogP (AlogP) 0.56
H-Bond Acceptor 14
H-Bond Donor 10
Rotatable Bonds 10

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2R,3R,4S,5R,6R)-2-[[(1S,3R,6S,8R,10S,11S,12S,14S,15R,16R)-10,14-dihydroxy-15-[(2R,5R)-5-hydroxy-6-methyl-6-[(2S,3R,4R,5R)-3,4,5-trihydroxyoxan-2-yl]oxyheptan-2-yl]-7,7,12,16-tetramethyl-6-pentacyclo[9.7.0.01,3.03,8.012,16]octadecanyl]oxy]-6-(hydroxymethyl)oxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.4805 48.05%
Caco-2 - 0.8767 87.67%
Blood Brain Barrier - 0.5750 57.50%
Human oral bioavailability - 0.8286 82.86%
Subcellular localzation Mitochondria 0.5846 58.46%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8123 81.23%
OATP1B3 inhibitior + 0.9122 91.22%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.5750 57.50%
BSEP inhibitior - 0.7781 77.81%
P-glycoprotein inhibitior + 0.7601 76.01%
P-glycoprotein substrate + 0.5000 50.00%
CYP3A4 substrate + 0.7273 72.73%
CYP2C9 substrate - 0.8054 80.54%
CYP2D6 substrate - 0.8164 81.64%
CYP3A4 inhibition - 0.9472 94.72%
CYP2C9 inhibition - 0.7996 79.96%
CYP2C19 inhibition - 0.8391 83.91%
CYP2D6 inhibition - 0.9505 95.05%
CYP1A2 inhibition - 0.8918 89.18%
CYP2C8 inhibition + 0.6361 63.61%
CYP inhibitory promiscuity - 0.9671 96.71%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.6868 68.68%
Eye corrosion - 0.9895 98.95%
Eye irritation - 0.9066 90.66%
Skin irritation - 0.7152 71.52%
Skin corrosion - 0.9483 94.83%
Ames mutagenesis - 0.6348 63.48%
Human Ether-a-go-go-Related Gene inhibition + 0.7549 75.49%
Micronuclear - 0.8000 80.00%
Hepatotoxicity - 0.8247 82.47%
skin sensitisation - 0.9113 91.13%
Respiratory toxicity - 0.5444 54.44%
Reproductive toxicity + 0.7444 74.44%
Mitochondrial toxicity - 0.5875 58.75%
Nephrotoxicity - 0.8261 82.61%
Acute Oral Toxicity (c) I 0.6066 60.66%
Estrogen receptor binding + 0.7024 70.24%
Androgen receptor binding + 0.7517 75.17%
Thyroid receptor binding - 0.5739 57.39%
Glucocorticoid receptor binding + 0.6090 60.90%
Aromatase binding + 0.6629 66.29%
PPAR gamma + 0.6939 69.39%
Honey bee toxicity - 0.6279 62.79%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.6800 68.00%
Fish aquatic toxicity + 0.8024 80.24%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL253 P34972 Cannabinoid CB2 receptor 99.56% 97.25%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.90% 91.11%
CHEMBL3137262 O60341 LSD1/CoREST complex 96.28% 97.09%
CHEMBL6136 O60341 Lysine-specific histone demethylase 1 96.22% 95.58%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.07% 96.09%
CHEMBL1907605 P24864 Cyclin-dependent kinase 2/cyclin E1 95.94% 92.88%
CHEMBL218 P21554 Cannabinoid CB1 receptor 92.71% 96.61%
CHEMBL2581 P07339 Cathepsin D 91.53% 98.95%
CHEMBL284 P27487 Dipeptidyl peptidase IV 91.36% 95.69%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 89.99% 97.14%
CHEMBL2996 Q05655 Protein kinase C delta 89.42% 97.79%
CHEMBL5888 Q99558 Mitogen-activated protein kinase kinase kinase 14 89.23% 100.00%
CHEMBL2094135 Q96BI3 Gamma-secretase 88.86% 98.05%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 88.67% 94.45%
CHEMBL344 Q99705 Melanin-concentrating hormone receptor 1 88.09% 92.50%
CHEMBL225 P28335 Serotonin 2c (5-HT2c) receptor 87.97% 89.62%
CHEMBL5469 Q14289 Protein tyrosine kinase 2 beta 87.54% 91.03%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 87.52% 91.24%
CHEMBL2007625 O75874 Isocitrate dehydrogenase [NADP] cytoplasmic 86.98% 99.00%
CHEMBL1293316 Q9HBX9 Relaxin receptor 1 86.84% 82.50%
CHEMBL1994 P08235 Mineralocorticoid receptor 86.63% 100.00%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 86.22% 96.21%
CHEMBL5608 Q16288 NT-3 growth factor receptor 86.14% 95.89%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 85.93% 96.47%
CHEMBL3145 P42338 PI3-kinase p110-beta subunit 85.85% 98.75%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 85.67% 100.00%
CHEMBL4482 O96013 Serine/threonine-protein kinase PAK 4 85.61% 95.42%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 85.42% 91.07%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 85.24% 92.86%
CHEMBL4581 P52732 Kinesin-like protein 1 85.05% 93.18%
CHEMBL2781 P19634 Sodium/hydrogen exchanger 1 84.70% 90.24%
CHEMBL1806 P11388 DNA topoisomerase II alpha 83.54% 89.00%
CHEMBL4227 P25090 Lipoxin A4 receptor 83.53% 100.00%
CHEMBL226 P30542 Adenosine A1 receptor 83.45% 95.93%
CHEMBL206 P03372 Estrogen receptor alpha 83.32% 97.64%
CHEMBL1937 Q92769 Histone deacetylase 2 82.89% 94.75%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 82.73% 96.77%
CHEMBL2534 O15530 3-phosphoinositide dependent protein kinase-1 82.65% 95.36%
CHEMBL237 P41145 Kappa opioid receptor 82.59% 98.10%
CHEMBL2095194 P08709 Coagulation factor VII/tissue factor 82.47% 99.17%
CHEMBL4302 P08183 P-glycoprotein 1 81.51% 92.98%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 81.21% 95.50%
CHEMBL3267 P48736 PI3-kinase p110-gamma subunit 80.77% 95.71%
CHEMBL4105786 P41182 B-cell lymphoma 6 protein 80.51% 92.86%
CHEMBL259 P32245 Melanocortin receptor 4 80.41% 95.38%
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 80.39% 97.29%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 80.00% 95.83%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Tarenna gracilipes

Cross-Links

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PubChem 162857101
LOTUS LTS0089320
wikiData Q104936188