Cordifoline

Details

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Internal ID 7ce99c6b-5e87-450b-8ee0-f68f6edebd08
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides
IUPAC Name 1-[[(2S)-3-ethenyl-5-methoxycarbonyl-2-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-3,4-dihydro-2H-pyran-4-yl]methyl]-6-hydroxy-9H-pyrido[3,4-b]indole-3-carboxylic acid
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C28H30N2O12/c1-3-12-13(7-18-21-15(8-19(29-18)25(36)37)14-6-11(32)4-5-17(14)30-21)16(26(38)39-2)10-40-27(12)42-28-24(35)23(34)22(33)20(9-31)41-28/h3-6,8,10,12-13,20,22-24,27-28,30-35H,1,7,9H2,2H3,(H,36,37)/t12?,13?,20-,22-,23+,24-,27+,28+/m1/s1
InChI Key HFPKTEZZZRPDQU-XNKVVINBSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C28H30N2O12
Molecular Weight 586.50 g/mol
Exact Mass 586.17987440 g/mol
Topological Polar Surface Area (TPSA) 221.00 Ų
XlogP 0.80
Atomic LogP (AlogP) 0.31
H-Bond Acceptor 12
H-Bond Donor 7
Rotatable Bonds 8

Synonyms

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CHEMBL452188

2D Structure

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2D Structure of Cordifoline

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8093 80.93%
Caco-2 - 0.9024 90.24%
Blood Brain Barrier - 0.7750 77.50%
Human oral bioavailability - 0.8429 84.29%
Subcellular localzation Nucleus 0.4201 42.01%
OATP2B1 inhibitior - 0.8526 85.26%
OATP1B1 inhibitior + 0.7637 76.37%
OATP1B3 inhibitior + 0.9495 94.95%
MATE1 inhibitior - 0.9200 92.00%
OCT2 inhibitior - 0.9000 90.00%
BSEP inhibitior + 0.8163 81.63%
P-glycoprotein inhibitior - 0.4473 44.73%
P-glycoprotein substrate + 0.6263 62.63%
CYP3A4 substrate + 0.6896 68.96%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8657 86.57%
CYP3A4 inhibition - 0.8808 88.08%
CYP2C9 inhibition - 0.7277 72.77%
CYP2C19 inhibition - 0.7677 76.77%
CYP2D6 inhibition - 0.8356 83.56%
CYP1A2 inhibition - 0.7042 70.42%
CYP2C8 inhibition + 0.8133 81.33%
CYP inhibitory promiscuity - 0.5552 55.52%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.6183 61.83%
Eye corrosion - 0.9866 98.66%
Eye irritation - 0.9288 92.88%
Skin irritation - 0.7909 79.09%
Skin corrosion - 0.9352 93.52%
Ames mutagenesis + 0.5677 56.77%
Human Ether-a-go-go-Related Gene inhibition - 0.4208 42.08%
Micronuclear + 0.7800 78.00%
Hepatotoxicity - 0.5103 51.03%
skin sensitisation - 0.8360 83.60%
Respiratory toxicity + 0.6000 60.00%
Reproductive toxicity + 0.9222 92.22%
Mitochondrial toxicity + 0.8875 88.75%
Nephrotoxicity + 0.5405 54.05%
Acute Oral Toxicity (c) III 0.6100 61.00%
Estrogen receptor binding + 0.7880 78.80%
Androgen receptor binding + 0.6648 66.48%
Thyroid receptor binding + 0.5679 56.79%
Glucocorticoid receptor binding + 0.5909 59.09%
Aromatase binding - 0.5000 50.00%
PPAR gamma + 0.7254 72.54%
Honey bee toxicity - 0.7571 75.71%
Biodegradation - 0.9000 90.00%
Crustacea aquatic toxicity - 0.7300 73.00%
Fish aquatic toxicity + 0.7173 71.73%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.29% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.02% 96.09%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 96.75% 94.45%
CHEMBL4040 P28482 MAP kinase ERK2 95.37% 83.82%
CHEMBL3060 Q9Y345 Glycine transporter 2 94.06% 99.17%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 91.65% 85.14%
CHEMBL220 P22303 Acetylcholinesterase 90.63% 94.45%
CHEMBL2581 P07339 Cathepsin D 90.54% 98.95%
CHEMBL4630 O14757 Serine/threonine-protein kinase Chk1 89.59% 97.03%
CHEMBL3401 O75469 Pregnane X receptor 89.06% 94.73%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 88.16% 99.23%
CHEMBL1293249 Q13887 Kruppel-like factor 5 87.64% 86.33%
CHEMBL1811 P34995 Prostanoid EP1 receptor 87.22% 95.71%
CHEMBL213 P08588 Beta-1 adrenergic receptor 86.36% 95.56%
CHEMBL1951 P21397 Monoamine oxidase A 84.72% 91.49%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 84.05% 96.00%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 83.27% 96.21%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 81.87% 90.71%
CHEMBL3976 Q9UHL4 Dipeptidyl peptidase II 81.58% 92.29%
CHEMBL1806 P11388 DNA topoisomerase II alpha 80.60% 89.00%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 80.59% 86.92%
CHEMBL2292 Q13627 Dual-specificity tyrosine-phosphorylation regulated kinase 1A 80.00% 93.24%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Chimarrhis turbinata

Cross-Links

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PubChem 44575749
LOTUS LTS0017803
wikiData Q104398886