Borrelidin B

Details

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Internal ID 9dd2b7b2-6483-4396-8aeb-8a23d007a4eb
Taxonomy Phenylpropanoids and polyketides > Macrolides and analogues
IUPAC Name trans-(1R,2R)-2-[(2S,4E,6Z,8R,9S,11R,13S,15S,16S)-7-(aminomethyl)-8,16-dihydroxy-9,11,13,15-tetramethyl-18-oxo-1-oxacyclooctadeca-4,6-dien-2-yl]cyclopentane-1-carboxylic acid
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C28H47NO6/c1-17-12-18(2)14-20(4)27(32)21(16-29)8-5-6-11-25(22-9-7-10-23(22)28(33)34)35-26(31)15-24(30)19(3)13-17/h5-6,8,17-20,22-25,27,30,32H,7,9-16,29H2,1-4H3,(H,33,34)/b6-5+,21-8-/t17-,18+,19-,20-,22+,23+,24-,25-,27+/m0/s1
InChI Key HSRFFKHGZLNWNZ-UGKRXNSESA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C28H47NO6
Molecular Weight 493.70 g/mol
Exact Mass 493.34033822 g/mol
Topological Polar Surface Area (TPSA) 130.00 Ų
XlogP 2.30
Atomic LogP (AlogP) 4.07
H-Bond Acceptor 6
H-Bond Donor 4
Rotatable Bonds 3

Synonyms

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Treponemycin amine
(+)-Borrelidin B
BNT9RGB8J9
97328-86-4
(1R,2R)-2-((2S,4E,6Z,8R,9S,11R,13S,15S,16S)-7-(Aminomethyl)-8,16-dihydroxy-9,11,13,15-tetramethyl-18-oxooxacyclooctadeca-4,6-dien-2-yl)cyclopentanecarboxylic acid
Cyclopentanecarboxylic acid, 2-((2S,4E,6Z,8R,9S,11R,13S,15S,16S)-7-(aminomethyl)-8,16-dihydroxy-9,11,13,15-tetramethyl-18-oxooxacyclooctadeca-4,6-dien-2-yl)-, (1R,2R)-
UNII-BNT9RGB8J9
CHEMBL3355648
CHEBI:189325
(1R,2R)-2-[(2S,4E,6Z,8R,9S,11R,13S,15S,16S)-7-(aminomethyl)-8,16-dihydroxy-9,11,13,15-tetramethyl-18-oxo-1-oxacyclooctadeca-4,6-dien-2-yl]cyclopentane-1-carboxylic acid

2D Structure

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2D Structure of Borrelidin B

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7897 78.97%
Caco-2 - 0.7338 73.38%
Blood Brain Barrier - 0.6000 60.00%
Human oral bioavailability - 0.7286 72.86%
Subcellular localzation Mitochondria 0.5888 58.88%
OATP2B1 inhibitior - 0.8686 86.86%
OATP1B1 inhibitior + 0.8579 85.79%
OATP1B3 inhibitior + 0.9394 93.94%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.8542 85.42%
BSEP inhibitior + 0.6646 66.46%
P-glycoprotein inhibitior - 0.4716 47.16%
P-glycoprotein substrate + 0.5000 50.00%
CYP3A4 substrate + 0.6197 61.97%
CYP2C9 substrate - 0.8366 83.66%
CYP2D6 substrate - 0.8397 83.97%
CYP3A4 inhibition - 0.8522 85.22%
CYP2C9 inhibition - 0.8600 86.00%
CYP2C19 inhibition - 0.7945 79.45%
CYP2D6 inhibition - 0.9131 91.31%
CYP1A2 inhibition - 0.7401 74.01%
CYP2C8 inhibition + 0.5162 51.62%
CYP inhibitory promiscuity - 0.9509 95.09%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9300 93.00%
Carcinogenicity (trinary) Non-required 0.6237 62.37%
Eye corrosion - 0.9862 98.62%
Eye irritation - 0.9674 96.74%
Skin irritation - 0.7061 70.61%
Skin corrosion - 0.9309 93.09%
Ames mutagenesis - 0.5400 54.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7040 70.40%
Micronuclear - 0.6800 68.00%
Hepatotoxicity + 0.6375 63.75%
skin sensitisation - 0.8614 86.14%
Respiratory toxicity + 0.8000 80.00%
Reproductive toxicity + 0.6667 66.67%
Mitochondrial toxicity + 0.8125 81.25%
Nephrotoxicity - 0.6650 66.50%
Acute Oral Toxicity (c) III 0.5488 54.88%
Estrogen receptor binding + 0.6774 67.74%
Androgen receptor binding + 0.7729 77.29%
Thyroid receptor binding - 0.5686 56.86%
Glucocorticoid receptor binding + 0.6830 68.30%
Aromatase binding - 0.5000 50.00%
PPAR gamma - 0.6101 61.01%
Honey bee toxicity - 0.8604 86.04%
Biodegradation - 0.6750 67.50%
Crustacea aquatic toxicity + 0.5600 56.00%
Fish aquatic toxicity + 0.8425 84.25%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.31% 96.09%
CHEMBL3137262 O60341 LSD1/CoREST complex 93.07% 97.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 91.82% 95.56%
CHEMBL253 P34972 Cannabinoid CB2 receptor 90.91% 97.25%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 90.71% 91.11%
CHEMBL4481 P35228 Nitric oxide synthase, inducible 87.24% 94.80%
CHEMBL2581 P07339 Cathepsin D 87.04% 98.95%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 84.52% 85.14%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 83.48% 95.50%
CHEMBL3713062 P10646 Tissue factor pathway inhibitor 83.44% 97.33%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 83.37% 96.95%
CHEMBL1293249 Q13887 Kruppel-like factor 5 83.25% 86.33%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 81.01% 93.04%
CHEMBL3060 Q9Y345 Glycine transporter 2 80.98% 99.17%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 118720979
LOTUS LTS0157560
wikiData Q105033212