methyl (2S,7S)-5,5-dimethyl-13-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-4,6,12-trioxatricyclo[7.4.0.02,7]tridec-10-ene-10-carboxylate

Details

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Internal ID dfafcb72-4df1-46eb-a5d8-054240d8b6c8
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Glycosyl compounds > O-glycosyl compounds
IUPAC Name methyl (2S,7S)-5,5-dimethyl-13-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-4,6,12-trioxatricyclo[7.4.0.02,7]tridec-10-ene-10-carboxylate
SMILES (Canonical) CC1(OCC2C(O1)CC3C2C(OC=C3C(=O)OC)OC4C(C(C(C(O4)CO)O)O)O)C
SMILES (Isomeric) CC1(OC[C@H]2[C@@H](O1)CC3C2C(OC=C3C(=O)OC)O[C@H]4[C@@H]([C@H]([C@@H]([C@H](O4)CO)O)O)O)C
InChI InChI=1S/C20H30O11/c1-20(2)28-7-10-11(31-20)4-8-9(17(25)26-3)6-27-18(13(8)10)30-19-16(24)15(23)14(22)12(5-21)29-19/h6,8,10-16,18-19,21-24H,4-5,7H2,1-3H3/t8?,10-,11-,12+,13?,14+,15-,16+,18?,19-/m0/s1
InChI Key YAIGDKVCMQAHRK-WLZQLHOFSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C20H30O11
Molecular Weight 446.40 g/mol
Exact Mass 446.17881177 g/mol
Topological Polar Surface Area (TPSA) 153.00 Ų
XlogP -1.00
Atomic LogP (AlogP) -1.38
H-Bond Acceptor 11
H-Bond Donor 4
Rotatable Bonds 4

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of methyl (2S,7S)-5,5-dimethyl-13-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-4,6,12-trioxatricyclo[7.4.0.02,7]tridec-10-ene-10-carboxylate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.4645 46.45%
Caco-2 - 0.8300 83.00%
Blood Brain Barrier - 0.5500 55.00%
Human oral bioavailability - 0.7857 78.57%
Subcellular localzation Mitochondria 0.7821 78.21%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.7171 71.71%
OATP1B3 inhibitior + 0.9016 90.16%
MATE1 inhibitior - 0.9412 94.12%
OCT2 inhibitior - 0.9250 92.50%
BSEP inhibitior - 0.8110 81.10%
P-glycoprotein inhibitior - 0.7170 71.70%
P-glycoprotein substrate - 0.6163 61.63%
CYP3A4 substrate + 0.6593 65.93%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8671 86.71%
CYP3A4 inhibition - 0.9489 94.89%
CYP2C9 inhibition - 0.8978 89.78%
CYP2C19 inhibition - 0.8678 86.78%
CYP2D6 inhibition - 0.9166 91.66%
CYP1A2 inhibition - 0.8882 88.82%
CYP2C8 inhibition + 0.4725 47.25%
CYP inhibitory promiscuity - 0.9082 90.82%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.7057 70.57%
Eye corrosion - 0.9884 98.84%
Eye irritation - 0.9603 96.03%
Skin irritation - 0.7437 74.37%
Skin corrosion - 0.9544 95.44%
Ames mutagenesis - 0.5648 56.48%
Human Ether-a-go-go-Related Gene inhibition - 0.4682 46.82%
Micronuclear - 0.8300 83.00%
Hepatotoxicity - 0.8199 81.99%
skin sensitisation - 0.8655 86.55%
Respiratory toxicity + 0.7111 71.11%
Reproductive toxicity + 0.8111 81.11%
Mitochondrial toxicity + 0.5250 52.50%
Nephrotoxicity + 0.5789 57.89%
Acute Oral Toxicity (c) III 0.4742 47.42%
Estrogen receptor binding + 0.8669 86.69%
Androgen receptor binding + 0.5919 59.19%
Thyroid receptor binding + 0.5865 58.65%
Glucocorticoid receptor binding + 0.5875 58.75%
Aromatase binding + 0.6631 66.31%
PPAR gamma - 0.4907 49.07%
Honey bee toxicity - 0.7611 76.11%
Biodegradation - 0.8750 87.50%
Crustacea aquatic toxicity - 0.7200 72.00%
Fish aquatic toxicity + 0.9061 90.61%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.73% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.55% 96.09%
CHEMBL218 P21554 Cannabinoid CB1 receptor 90.33% 96.61%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 89.16% 91.24%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 89.12% 86.92%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 88.77% 94.45%
CHEMBL3401 O75469 Pregnane X receptor 88.54% 94.73%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 87.99% 85.14%
CHEMBL3137262 O60341 LSD1/CoREST complex 87.81% 97.09%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 84.83% 96.00%
CHEMBL5255 O00206 Toll-like receptor 4 84.36% 92.50%
CHEMBL1293249 Q13887 Kruppel-like factor 5 83.33% 86.33%
CHEMBL4208 P20618 Proteasome component C5 82.99% 90.00%
CHEMBL1994 P08235 Mineralocorticoid receptor 82.85% 100.00%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 82.83% 95.83%
CHEMBL1806 P11388 DNA topoisomerase II alpha 82.75% 89.00%
CHEMBL3060 Q9Y345 Glycine transporter 2 82.55% 99.17%
CHEMBL340 P08684 Cytochrome P450 3A4 80.94% 91.19%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 80.88% 96.95%
CHEMBL5028 O14672 ADAM10 80.73% 97.50%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Hedychium spicatum

Cross-Links

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PubChem 24893886
NPASS NPC287839