(2S,4S,5R)-2-[(2R,4S,5R,6S)-4-hydroxy-2-[(1S,2S,4S,5'R,6R,8R,9S,12S,13R,14S,16R)-16-hydroxy-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-ene-6,2'-oxane]-14-yl]oxy-6-methyl-5-[(2S,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-3-yl]oxy-6-methyloxane-3,4,5-triol

Details

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Internal ID 0566669b-069e-4732-bb26-49f868a63a6c
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name (2S,4S,5R)-2-[(2R,4S,5R,6S)-4-hydroxy-2-[(1S,2S,4S,5'R,6R,8R,9S,12S,13R,14S,16R)-16-hydroxy-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-ene-6,2'-oxane]-14-yl]oxy-6-methyl-5-[(2S,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-3-yl]oxy-6-methyloxane-3,4,5-triol
SMILES (Canonical) CC1CCC2(C(C3C(O2)CC4C3(CCC5C4CC=C6C5(C(CC(C6)O)OC7C(C(C(C(O7)C)OC8C(C(C(CO8)O)O)O)O)OC9C(C(C(C(O9)C)O)O)O)C)C)C)OC1
SMILES (Isomeric) C[C@@H]1CC[C@@]2(C([C@H]3[C@@H](O2)C[C@@H]4[C@@]3(CC[C@H]5[C@H]4CC=C6[C@@]5([C@H](C[C@@H](C6)O)O[C@H]7C([C@H]([C@H]([C@@H](O7)C)O[C@H]8C([C@H]([C@@H](CO8)O)O)O)O)O[C@H]9C([C@H]([C@H](C(O9)C)O)O)O)C)C)C)OC1
InChI InChI=1S/C44H70O16/c1-18-9-12-44(54-16-18)19(2)30-28(60-44)15-26-24-8-7-22-13-23(45)14-29(43(22,6)25(24)10-11-42(26,30)5)57-41-38(59-40-35(51)33(49)31(47)20(3)55-40)36(52)37(21(4)56-41)58-39-34(50)32(48)27(46)17-53-39/h7,18-21,23-41,45-52H,8-17H2,1-6H3/t18-,19?,20?,21+,23-,24-,25+,26+,27-,28+,29+,30+,31+,32+,33+,34?,35?,36+,37+,38?,39+,40+,41+,42+,43+,44-/m1/s1
InChI Key LCJXMCPWWOCKTK-FUYFEAPVSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C44H70O16
Molecular Weight 855.00 g/mol
Exact Mass 854.46638614 g/mol
Topological Polar Surface Area (TPSA) 236.00 Ų
XlogP 1.00
Atomic LogP (AlogP) 0.85
H-Bond Acceptor 16
H-Bond Donor 8
Rotatable Bonds 6

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2S,4S,5R)-2-[(2R,4S,5R,6S)-4-hydroxy-2-[(1S,2S,4S,5'R,6R,8R,9S,12S,13R,14S,16R)-16-hydroxy-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-ene-6,2'-oxane]-14-yl]oxy-6-methyl-5-[(2S,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-3-yl]oxy-6-methyloxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8347 83.47%
Caco-2 - 0.8870 88.70%
Blood Brain Barrier - 0.8500 85.00%
Human oral bioavailability - 0.7714 77.14%
Subcellular localzation Mitochondria 0.7441 74.41%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8707 87.07%
OATP1B3 inhibitior + 0.9359 93.59%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.6250 62.50%
BSEP inhibitior + 0.7928 79.28%
P-glycoprotein inhibitior + 0.7267 72.67%
P-glycoprotein substrate + 0.6146 61.46%
CYP3A4 substrate + 0.7563 75.63%
CYP2C9 substrate - 0.8060 80.60%
CYP2D6 substrate - 0.8129 81.29%
CYP3A4 inhibition - 0.9608 96.08%
CYP2C9 inhibition - 0.9190 91.90%
CYP2C19 inhibition - 0.9246 92.46%
CYP2D6 inhibition - 0.9280 92.80%
CYP1A2 inhibition - 0.9018 90.18%
CYP2C8 inhibition + 0.7724 77.24%
CYP inhibitory promiscuity - 0.9494 94.94%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.4901 49.01%
Eye corrosion - 0.9891 98.91%
Eye irritation - 0.9147 91.47%
Skin irritation - 0.5265 52.65%
Skin corrosion - 0.9394 93.94%
Ames mutagenesis - 0.7354 73.54%
Human Ether-a-go-go-Related Gene inhibition + 0.7582 75.82%
Micronuclear - 0.8500 85.00%
Hepatotoxicity - 0.7750 77.50%
skin sensitisation - 0.9030 90.30%
Respiratory toxicity + 0.7111 71.11%
Reproductive toxicity + 0.9111 91.11%
Mitochondrial toxicity + 0.6125 61.25%
Nephrotoxicity - 0.7803 78.03%
Acute Oral Toxicity (c) I 0.5153 51.53%
Estrogen receptor binding + 0.8007 80.07%
Androgen receptor binding + 0.7291 72.91%
Thyroid receptor binding - 0.5725 57.25%
Glucocorticoid receptor binding + 0.5925 59.25%
Aromatase binding + 0.6919 69.19%
PPAR gamma + 0.7354 73.54%
Honey bee toxicity - 0.5638 56.38%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity + 0.5100 51.00%
Fish aquatic toxicity + 0.9504 95.04%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.36% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.15% 91.11%
CHEMBL226 P30542 Adenosine A1 receptor 97.09% 95.93%
CHEMBL3137262 O60341 LSD1/CoREST complex 94.09% 97.09%
CHEMBL1293249 Q13887 Kruppel-like factor 5 92.94% 86.33%
CHEMBL1914 P06276 Butyrylcholinesterase 92.84% 95.00%
CHEMBL1994 P08235 Mineralocorticoid receptor 92.55% 100.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 91.66% 89.00%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 89.21% 95.89%
CHEMBL332 P03956 Matrix metalloproteinase-1 85.33% 94.50%
CHEMBL253 P34972 Cannabinoid CB2 receptor 84.66% 97.25%
CHEMBL221 P23219 Cyclooxygenase-1 84.58% 90.17%
CHEMBL2243 O00519 Anandamide amidohydrolase 84.55% 97.53%
CHEMBL3401 O75469 Pregnane X receptor 83.36% 94.73%
CHEMBL5255 O00206 Toll-like receptor 4 83.28% 92.50%
CHEMBL5608 Q16288 NT-3 growth factor receptor 83.08% 95.89%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 82.84% 94.00%
CHEMBL3922 P50579 Methionine aminopeptidase 2 82.14% 97.28%
CHEMBL241 Q14432 Phosphodiesterase 3A 82.12% 92.94%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 81.46% 92.62%
CHEMBL2581 P07339 Cathepsin D 81.34% 98.95%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 80.88% 93.04%
CHEMBL2815 P04629 Nerve growth factor receptor Trk-A 80.25% 87.16%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Liriope graminifolia

Cross-Links

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PubChem 101925304
LOTUS LTS0261712
wikiData Q104938102