(2R,3R,4S,5S,6R)-2-[[(3S,5R,6S,8R,9R,10R,12R,13R,14R,17S)-17-[(2R)-2,6-dihydroxy-6-methylheptan-2-yl]-3,12-dihydroxy-4,4,8,10,14-pentamethyl-2,3,5,6,7,9,11,12,13,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-6-yl]oxy]-6-(hydroxymethyl)oxane-3,4,5-triol

Details

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Internal ID 22aa7b3c-d816-4c0e-948d-7c0fc428efce
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Triterpene glycosides > Triterpene saponins
IUPAC Name (2R,3R,4S,5S,6R)-2-[[(3S,5R,6S,8R,9R,10R,12R,13R,14R,17S)-17-[(2R)-2,6-dihydroxy-6-methylheptan-2-yl]-3,12-dihydroxy-4,4,8,10,14-pentamethyl-2,3,5,6,7,9,11,12,13,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-6-yl]oxy]-6-(hydroxymethyl)oxane-3,4,5-triol
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C36H64O10/c1-31(2,43)12-9-13-36(8,44)19-10-15-34(6)25(19)20(38)16-23-33(5)14-11-24(39)32(3,4)29(33)21(17-35(23,34)7)45-30-28(42)27(41)26(40)22(18-37)46-30/h19-30,37-44H,9-18H2,1-8H3/t19-,20+,21-,22+,23+,24-,25-,26+,27-,28+,29-,30+,33+,34+,35+,36+/m0/s1
InChI Key LTEPQNJXCFBNEO-BIYWFNTMSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C36H64O10
Molecular Weight 656.90 g/mol
Exact Mass 656.44994823 g/mol
Topological Polar Surface Area (TPSA) 180.00 Ų
XlogP 2.90
Atomic LogP (AlogP) 2.49
H-Bond Acceptor 10
H-Bond Donor 8
Rotatable Bonds 8

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2R,3R,4S,5S,6R)-2-[[(3S,5R,6S,8R,9R,10R,12R,13R,14R,17S)-17-[(2R)-2,6-dihydroxy-6-methylheptan-2-yl]-3,12-dihydroxy-4,4,8,10,14-pentamethyl-2,3,5,6,7,9,11,12,13,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-6-yl]oxy]-6-(hydroxymethyl)oxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6620 66.20%
Caco-2 - 0.8364 83.64%
Blood Brain Barrier - 0.6000 60.00%
Human oral bioavailability - 0.7714 77.14%
Subcellular localzation Mitochondria 0.6681 66.81%
OATP2B1 inhibitior - 0.7237 72.37%
OATP1B1 inhibitior + 0.8459 84.59%
OATP1B3 inhibitior + 0.8978 89.78%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.6792 67.92%
BSEP inhibitior - 0.8806 88.06%
P-glycoprotein inhibitior + 0.6829 68.29%
P-glycoprotein substrate - 0.6764 67.64%
CYP3A4 substrate + 0.7227 72.27%
CYP2C9 substrate - 0.7983 79.83%
CYP2D6 substrate - 0.8352 83.52%
CYP3A4 inhibition - 0.8900 89.00%
CYP2C9 inhibition - 0.8438 84.38%
CYP2C19 inhibition - 0.8862 88.62%
CYP2D6 inhibition - 0.9602 96.02%
CYP1A2 inhibition - 0.8470 84.70%
CYP2C8 inhibition + 0.6143 61.43%
CYP inhibitory promiscuity - 0.9522 95.22%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.7385 73.85%
Eye corrosion - 0.9915 99.15%
Eye irritation - 0.9148 91.48%
Skin irritation - 0.6579 65.79%
Skin corrosion - 0.9528 95.28%
Ames mutagenesis - 0.7500 75.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7459 74.59%
Micronuclear - 0.8900 89.00%
Hepatotoxicity + 0.6112 61.12%
skin sensitisation - 0.9280 92.80%
Respiratory toxicity + 0.5111 51.11%
Reproductive toxicity + 0.7444 74.44%
Mitochondrial toxicity + 0.5625 56.25%
Nephrotoxicity - 0.7996 79.96%
Acute Oral Toxicity (c) I 0.4874 48.74%
Estrogen receptor binding + 0.6008 60.08%
Androgen receptor binding + 0.7398 73.98%
Thyroid receptor binding - 0.5376 53.76%
Glucocorticoid receptor binding + 0.5420 54.20%
Aromatase binding + 0.6625 66.25%
PPAR gamma + 0.6466 64.66%
Honey bee toxicity - 0.6328 63.28%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity + 0.5545 55.45%
Fish aquatic toxicity + 0.8417 84.17%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL253 P34972 Cannabinoid CB2 receptor 97.19% 97.25%
CHEMBL3137262 O60341 LSD1/CoREST complex 97.14% 97.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.78% 91.11%
CHEMBL2996 Q05655 Protein kinase C delta 95.80% 97.79%
CHEMBL226 P30542 Adenosine A1 receptor 95.15% 95.93%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.97% 96.09%
CHEMBL218 P21554 Cannabinoid CB1 receptor 92.20% 96.61%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 89.22% 96.21%
CHEMBL5888 Q99558 Mitogen-activated protein kinase kinase kinase 14 87.87% 100.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 87.81% 95.89%
CHEMBL241 Q14432 Phosphodiesterase 3A 87.42% 92.94%
CHEMBL1994 P08235 Mineralocorticoid receptor 87.26% 100.00%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 87.02% 95.50%
CHEMBL1293249 Q13887 Kruppel-like factor 5 86.17% 86.33%
CHEMBL1977 P11473 Vitamin D receptor 85.54% 99.43%
CHEMBL4227 P25090 Lipoxin A4 receptor 84.53% 100.00%
CHEMBL259 P32245 Melanocortin receptor 4 83.70% 95.38%
CHEMBL3713062 P10646 Tissue factor pathway inhibitor 83.61% 97.33%
CHEMBL6136 O60341 Lysine-specific histone demethylase 1 82.67% 95.58%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 82.32% 97.14%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 81.96% 96.90%
CHEMBL4105786 P41182 B-cell lymphoma 6 protein 81.80% 92.86%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 81.59% 95.83%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 81.09% 96.77%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 80.91% 95.56%
CHEMBL2581 P07339 Cathepsin D 80.88% 98.95%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 80.44% 89.05%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 80.03% 94.45%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Panax notoginseng

Cross-Links

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PubChem 21599927
NPASS NPC140446
LOTUS LTS0093862
wikiData Q105156912