Berchemol 4'-glucoside

Details

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Internal ID beef3e5c-4622-49c1-9945-b502725d1a4e
Taxonomy Lignans, neolignans and related compounds > Lignan glycosides
IUPAC Name (2S,3R,4S,5S,6R)-2-[4-[[(3S,4S,5R)-4-hydroxy-5-(4-hydroxy-3-methoxyphenyl)-4-(hydroxymethyl)oxolan-3-yl]methyl]-2-methoxyphenoxy]-6-(hydroxymethyl)oxane-3,4,5-triol
SMILES (Canonical) COC1=C(C=CC(=C1)CC2COC(C2(CO)O)C3=CC(=C(C=C3)O)OC)OC4C(C(C(C(O4)CO)O)O)O
SMILES (Isomeric) COC1=C(C=CC(=C1)C[C@H]2CO[C@@H]([C@]2(CO)O)C3=CC(=C(C=C3)O)OC)O[C@H]4[C@@H]([C@H]([C@@H]([C@H](O4)CO)O)O)O
InChI InChI=1S/C26H34O12/c1-34-18-9-14(4-5-16(18)29)24-26(33,12-28)15(11-36-24)7-13-3-6-17(19(8-13)35-2)37-25-23(32)22(31)21(30)20(10-27)38-25/h3-6,8-9,15,20-25,27-33H,7,10-12H2,1-2H3/t15-,20+,21+,22-,23+,24+,25+,26+/m0/s1
InChI Key ZEQWUXOJEZKMOA-MJBJHNMPSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C26H34O12
Molecular Weight 538.50 g/mol
Exact Mass 538.20502652 g/mol
Topological Polar Surface Area (TPSA) 188.00 Ų
XlogP -0.50
Atomic LogP (AlogP) -0.76
H-Bond Acceptor 12
H-Bond Donor 7
Rotatable Bonds 9

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Berchemol 4'-glucoside

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.6242 62.42%
Caco-2 - 0.8492 84.92%
Blood Brain Barrier + 0.5250 52.50%
Human oral bioavailability - 0.6857 68.57%
Subcellular localzation Mitochondria 0.7598 75.98%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8895 88.95%
OATP1B3 inhibitior + 0.9581 95.81%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.8250 82.50%
BSEP inhibitior - 0.5217 52.17%
P-glycoprotein inhibitior + 0.5944 59.44%
P-glycoprotein substrate - 0.6049 60.49%
CYP3A4 substrate + 0.6542 65.42%
CYP2C9 substrate - 0.8016 80.16%
CYP2D6 substrate - 0.8024 80.24%
CYP3A4 inhibition - 0.8694 86.94%
CYP2C9 inhibition - 0.8774 87.74%
CYP2C19 inhibition - 0.8248 82.48%
CYP2D6 inhibition - 0.9072 90.72%
CYP1A2 inhibition - 0.8866 88.66%
CYP2C8 inhibition + 0.7628 76.28%
CYP inhibitory promiscuity - 0.7682 76.82%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.5977 59.77%
Eye corrosion - 0.9913 99.13%
Eye irritation - 0.9280 92.80%
Skin irritation - 0.8358 83.58%
Skin corrosion - 0.9513 95.13%
Ames mutagenesis + 0.5100 51.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7732 77.32%
Micronuclear - 0.5100 51.00%
Hepatotoxicity - 0.8195 81.95%
skin sensitisation - 0.8726 87.26%
Respiratory toxicity + 0.5444 54.44%
Reproductive toxicity + 0.6889 68.89%
Mitochondrial toxicity - 0.5000 50.00%
Nephrotoxicity - 0.8865 88.65%
Acute Oral Toxicity (c) III 0.6307 63.07%
Estrogen receptor binding + 0.7732 77.32%
Androgen receptor binding + 0.5840 58.40%
Thyroid receptor binding + 0.5963 59.63%
Glucocorticoid receptor binding + 0.5985 59.85%
Aromatase binding + 0.5534 55.34%
PPAR gamma + 0.6578 65.78%
Honey bee toxicity - 0.7854 78.54%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.7000 70.00%
Fish aquatic toxicity + 0.8469 84.69%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.21% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.61% 96.09%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 96.70% 85.14%
CHEMBL2581 P07339 Cathepsin D 95.06% 98.95%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 93.53% 94.45%
CHEMBL3137262 O60341 LSD1/CoREST complex 92.62% 97.09%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 91.93% 94.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 91.42% 86.33%
CHEMBL5608 Q16288 NT-3 growth factor receptor 91.14% 95.89%
CHEMBL4145 Q9UKV0 Histone deacetylase 9 90.71% 85.49%
CHEMBL241 Q14432 Phosphodiesterase 3A 89.75% 92.94%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 89.20% 92.62%
CHEMBL3060 Q9Y345 Glycine transporter 2 88.02% 99.17%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 85.81% 86.92%
CHEMBL1806 P11388 DNA topoisomerase II alpha 85.78% 89.00%
CHEMBL4208 P20618 Proteasome component C5 85.59% 90.00%
CHEMBL1951 P21397 Monoamine oxidase A 84.70% 91.49%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 84.42% 97.14%
CHEMBL1907605 P24864 Cyclin-dependent kinase 2/cyclin E1 83.72% 92.88%
CHEMBL3492 P49721 Proteasome Macropain subunit 83.68% 90.24%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 83.32% 96.21%
CHEMBL3713062 P10646 Tissue factor pathway inhibitor 82.75% 97.33%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 82.35% 95.83%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 81.83% 95.89%
CHEMBL2716 Q8WUI4 Histone deacetylase 7 80.28% 89.44%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Valeriana officinalis

Cross-Links

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PubChem 10995118
NPASS NPC283995
LOTUS LTS0027808
wikiData Q105373538