2-(Hydroxymethyl)-6-[5',7,9,13-tetramethyl-17-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-16-yl]oxyoxane-3,4,5-triol

Details

Top
Internal ID 2e2a4602-ebe9-413a-bdb1-f0262636d20a
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name 2-(hydroxymethyl)-6-[5',7,9,13-tetramethyl-17-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-16-yl]oxyoxane-3,4,5-triol
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C39H64O14/c1-17-7-12-39(48-16-17)18(2)27-24(53-39)13-22-19-5-6-21-34(52-36-33(47)31(45)29(43)26(15-41)51-36)23(9-11-37(21,3)20(19)8-10-38(22,27)4)49-35-32(46)30(44)28(42)25(14-40)50-35/h17-36,40-47H,5-16H2,1-4H3
InChI Key XWXODMQVKYJUAO-UHFFFAOYSA-N
Popularity 0 references in papers

Physical and Chemical Properties

Top
Molecular Formula C39H64O14
Molecular Weight 756.90 g/mol
Exact Mass 756.42960671 g/mol
Topological Polar Surface Area (TPSA) 217.00 Ų
XlogP 2.10
Atomic LogP (AlogP) 0.41
H-Bond Acceptor 14
H-Bond Donor 8
Rotatable Bonds 6

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of 2-(Hydroxymethyl)-6-[5',7,9,13-tetramethyl-17-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-16-yl]oxyoxane-3,4,5-triol

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5917 59.17%
Caco-2 - 0.8755 87.55%
Blood Brain Barrier - 0.6750 67.50%
Human oral bioavailability - 0.7571 75.71%
Subcellular localzation Mitochondria 0.6898 68.98%
OATP2B1 inhibitior - 0.8644 86.44%
OATP1B1 inhibitior + 0.9026 90.26%
OATP1B3 inhibitior + 0.9448 94.48%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior + 0.5750 57.50%
BSEP inhibitior - 0.7635 76.35%
P-glycoprotein inhibitior + 0.7000 70.00%
P-glycoprotein substrate - 0.8014 80.14%
CYP3A4 substrate + 0.7381 73.81%
CYP2C9 substrate - 0.8054 80.54%
CYP2D6 substrate - 0.8164 81.64%
CYP3A4 inhibition - 0.9611 96.11%
CYP2C9 inhibition - 0.9091 90.91%
CYP2C19 inhibition - 0.8819 88.19%
CYP2D6 inhibition - 0.9566 95.66%
CYP1A2 inhibition - 0.9089 90.89%
CYP2C8 inhibition + 0.5760 57.60%
CYP inhibitory promiscuity - 0.9291 92.91%
UGT catelyzed + 0.9000 90.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.6271 62.71%
Eye corrosion - 0.9909 99.09%
Eye irritation - 0.9165 91.65%
Skin irritation - 0.7119 71.19%
Skin corrosion - 0.9532 95.32%
Ames mutagenesis - 0.8124 81.24%
Human Ether-a-go-go-Related Gene inhibition + 0.7463 74.63%
Micronuclear - 0.9200 92.00%
Hepatotoxicity - 0.9500 95.00%
skin sensitisation - 0.9466 94.66%
Respiratory toxicity + 0.7222 72.22%
Reproductive toxicity + 0.6222 62.22%
Mitochondrial toxicity - 0.5250 52.50%
Nephrotoxicity - 0.7082 70.82%
Acute Oral Toxicity (c) I 0.7761 77.61%
Estrogen receptor binding + 0.7142 71.42%
Androgen receptor binding + 0.6814 68.14%
Thyroid receptor binding - 0.6142 61.42%
Glucocorticoid receptor binding - 0.5882 58.82%
Aromatase binding + 0.6383 63.83%
PPAR gamma + 0.6348 63.48%
Honey bee toxicity - 0.4754 47.54%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity + 0.5700 57.00%
Fish aquatic toxicity + 0.8210 82.10%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.48% 96.09%
CHEMBL218 P21554 Cannabinoid CB1 receptor 96.09% 96.61%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.34% 91.11%
CHEMBL6136 O60341 Lysine-specific histone demethylase 1 94.14% 95.58%
CHEMBL226 P30542 Adenosine A1 receptor 93.73% 95.93%
CHEMBL3137262 O60341 LSD1/CoREST complex 92.45% 97.09%
CHEMBL1994 P08235 Mineralocorticoid receptor 91.11% 100.00%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 90.36% 95.50%
CHEMBL237 P41145 Kappa opioid receptor 90.14% 98.10%
CHEMBL3922 P50579 Methionine aminopeptidase 2 89.65% 97.28%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 89.00% 89.05%
CHEMBL1163125 O60885 Bromodomain-containing protein 4 88.92% 97.31%
CHEMBL253 P34972 Cannabinoid CB2 receptor 88.23% 97.25%
CHEMBL4618 P09960 Leukotriene A4 hydrolase 88.03% 97.86%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 87.98% 95.89%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 86.00% 94.45%
CHEMBL5255 O00206 Toll-like receptor 4 85.52% 92.50%
CHEMBL233 P35372 Mu opioid receptor 85.15% 97.93%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 84.85% 96.21%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 84.85% 100.00%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 84.58% 96.95%
CHEMBL259 P32245 Melanocortin receptor 4 84.21% 95.38%
CHEMBL5608 Q16288 NT-3 growth factor receptor 84.08% 95.89%
CHEMBL2243 O00519 Anandamide amidohydrolase 83.14% 97.53%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 82.91% 92.86%
CHEMBL2072 P35499 Sodium channel protein type IV alpha subunit 82.63% 92.32%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 82.21% 86.92%
CHEMBL2842 P42345 Serine/threonine-protein kinase mTOR 82.18% 92.78%
CHEMBL4370 P16662 UDP-glucuronosyltransferase 2B7 81.63% 100.00%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 81.26% 96.77%
CHEMBL1806 P11388 DNA topoisomerase II alpha 80.90% 89.00%
CHEMBL249 P25103 Neurokinin 1 receptor 80.66% 99.17%
CHEMBL5888 Q99558 Mitogen-activated protein kinase kinase kinase 14 80.16% 100.00%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

Top
PubChem 162842936
LOTUS LTS0063374
wikiData Q105343863