(4S,5S,6S)-6-(((4-Bromo-1H-pyrrole-2-carbonyl)oxy)methyl)-5-hydroxy-6-methyl-1,4,5,6-tetrahydropyrimidine-4-carboxylic acid

Details

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Internal ID be47d894-1abd-4ac3-af78-bd042d94e71f
Taxonomy Organic acids and derivatives > Carboxylic acids and derivatives > Amino acids, peptides, and analogues > Alpha amino acids and derivatives
IUPAC Name (4S,5S,6S)-6-[(4-bromo-1H-pyrrole-2-carbonyl)oxymethyl]-5-hydroxy-6-methyl-4,5-dihydro-1H-pyrimidine-4-carboxylic acid
SMILES (Canonical) CC1(C(C(N=CN1)C(=O)O)O)COC(=O)C2=CC(=CN2)Br
SMILES (Isomeric) C[C@@]1([C@H]([C@H](N=CN1)C(=O)O)O)COC(=O)C2=CC(=CN2)Br
InChI InChI=1S/C12H14BrN3O5/c1-12(9(17)8(10(18)19)15-5-16-12)4-21-11(20)7-2-6(13)3-14-7/h2-3,5,8-9,14,17H,4H2,1H3,(H,15,16)(H,18,19)/t8-,9-,12-/m0/s1
InChI Key RMRGGLUETWXFCH-AUTRQRHGSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C12H14BrN3O5
Molecular Weight 360.16 g/mol
Exact Mass 359.01168 g/mol
Topological Polar Surface Area (TPSA) 124.00 Ų
XlogP 0.60
Atomic LogP (AlogP) 0.14
H-Bond Acceptor 6
H-Bond Donor 4
Rotatable Bonds 4

Synonyms

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(4S,5S,6S)-6-(((4-Bromo-1H-pyrrole-2-carbonyl)oxy)methyl)-5-hydroxy-6-methyl-1,4,5,6-tetrahydropyrimidine-4-carboxylic acid
InChI=1/C12H14BrN3O5/c1-12(9(17)8(10(18)19)15-5-16-12)4-21-11(20)7-2-6(13)3-14-7/h2-3,5,8-9,14,17H,4H2,1H3,(H,15,16)(H,18,19)/t8-,9-,12-/m0/s

2D Structure

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2D Structure of (4S,5S,6S)-6-(((4-Bromo-1H-pyrrole-2-carbonyl)oxy)methyl)-5-hydroxy-6-methyl-1,4,5,6-tetrahydropyrimidine-4-carboxylic acid

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6931 69.31%
Caco-2 - 0.7668 76.68%
Blood Brain Barrier + 0.5750 57.50%
Human oral bioavailability - 0.5143 51.43%
Subcellular localzation Mitochondria 0.4360 43.60%
OATP2B1 inhibitior - 0.8536 85.36%
OATP1B1 inhibitior + 0.8915 89.15%
OATP1B3 inhibitior + 0.9422 94.22%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.9000 90.00%
BSEP inhibitior - 0.6687 66.87%
P-glycoprotein inhibitior - 0.9386 93.86%
P-glycoprotein substrate - 0.8086 80.86%
CYP3A4 substrate + 0.5934 59.34%
CYP2C9 substrate + 0.6090 60.90%
CYP2D6 substrate - 0.8647 86.47%
CYP3A4 inhibition - 0.8517 85.17%
CYP2C9 inhibition - 0.7445 74.45%
CYP2C19 inhibition - 0.7319 73.19%
CYP2D6 inhibition - 0.8564 85.64%
CYP1A2 inhibition - 0.6608 66.08%
CYP2C8 inhibition - 0.5823 58.23%
CYP inhibitory promiscuity - 0.7713 77.13%
UGT catelyzed + 0.9000 90.00%
Carcinogenicity (binary) - 0.8561 85.61%
Carcinogenicity (trinary) Non-required 0.5476 54.76%
Eye corrosion - 0.9863 98.63%
Eye irritation - 0.9832 98.32%
Skin irritation - 0.7807 78.07%
Skin corrosion - 0.9268 92.68%
Ames mutagenesis - 0.5400 54.00%
Human Ether-a-go-go-Related Gene inhibition - 0.7113 71.13%
Micronuclear + 0.8059 80.59%
Hepatotoxicity - 0.5093 50.93%
skin sensitisation - 0.8139 81.39%
Respiratory toxicity + 0.6667 66.67%
Reproductive toxicity + 0.8333 83.33%
Mitochondrial toxicity + 0.8125 81.25%
Nephrotoxicity - 0.9165 91.65%
Acute Oral Toxicity (c) III 0.5944 59.44%
Estrogen receptor binding + 0.6420 64.20%
Androgen receptor binding - 0.5704 57.04%
Thyroid receptor binding - 0.6772 67.72%
Glucocorticoid receptor binding - 0.5573 55.73%
Aromatase binding + 0.7036 70.36%
PPAR gamma - 0.5856 58.56%
Honey bee toxicity - 0.7637 76.37%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.6005 60.05%
Fish aquatic toxicity + 0.6560 65.60%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.86% 96.09%
CHEMBL221 P23219 Cyclooxygenase-1 94.40% 90.17%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 93.35% 94.45%
CHEMBL2581 P07339 Cathepsin D 91.62% 98.95%
CHEMBL1293249 Q13887 Kruppel-like factor 5 85.22% 86.33%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 84.31% 94.00%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 83.78% 91.11%
CHEMBL2035 P08912 Muscarinic acetylcholine receptor M5 83.61% 94.62%
CHEMBL2716 Q8WUI4 Histone deacetylase 7 80.85% 89.44%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 80.03% 95.56%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Leiboldia serrata
Marah fabacea

Cross-Links

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PubChem 5323782
NPASS NPC104182