[(2S,3R,4R,5R,6S)-6-[[(3S,7S,8S,9S,10S,13S,14S,16S,17R)-3-[(2S,3R,4R,5S)-4,5-diacetyloxy-3-hydroxyoxan-2-yl]oxy-7-hydroxy-4,4,9,13,14-pentamethyl-17-[(2S)-6-methylhept-5-en-2-yl]-2,3,7,8,10,11,12,15,16,17-decahydro-1H-cyclopenta[a]phenanthren-16-yl]oxy]-3,4,5-trihydroxyoxan-2-yl]methyl acetate

Details

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Internal ID 4540f589-9243-4216-ae08-16afc3b1aa41
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins > Cucurbitacin glycosides
IUPAC Name [(2S,3R,4R,5R,6S)-6-[[(3S,7S,8S,9S,10S,13S,14S,16S,17R)-3-[(2S,3R,4R,5S)-4,5-diacetyloxy-3-hydroxyoxan-2-yl]oxy-7-hydroxy-4,4,9,13,14-pentamethyl-17-[(2S)-6-methylhept-5-en-2-yl]-2,3,7,8,10,11,12,15,16,17-decahydro-1H-cyclopenta[a]phenanthren-16-yl]oxy]-3,4,5-trihydroxyoxan-2-yl]methyl acetate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C47H74O15/c1-23(2)13-12-14-24(3)35-31(60-43-38(54)37(53)36(52)32(61-43)21-56-25(4)48)20-47(11)41-30(51)19-29-28(45(41,9)17-18-46(35,47)10)15-16-34(44(29,7)8)62-42-39(55)40(59-27(6)50)33(22-57-42)58-26(5)49/h13,19,24,28,30-43,51-55H,12,14-18,20-22H2,1-11H3/t24-,28+,30-,31-,32-,33-,34-,35-,36-,37+,38+,39+,40-,41-,42-,43-,45-,46-,47-/m0/s1
InChI Key HZVGDAABVDIGIT-GCVHZYBISA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C47H74O15
Molecular Weight 879.10 g/mol
Exact Mass 878.50277165 g/mol
Topological Polar Surface Area (TPSA) 217.00 Ų
XlogP 4.80
Atomic LogP (AlogP) 4.28
H-Bond Acceptor 15
H-Bond Donor 5
Rotatable Bonds 12

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of [(2S,3R,4R,5R,6S)-6-[[(3S,7S,8S,9S,10S,13S,14S,16S,17R)-3-[(2S,3R,4R,5S)-4,5-diacetyloxy-3-hydroxyoxan-2-yl]oxy-7-hydroxy-4,4,9,13,14-pentamethyl-17-[(2S)-6-methylhept-5-en-2-yl]-2,3,7,8,10,11,12,15,16,17-decahydro-1H-cyclopenta[a]phenanthren-16-yl]oxy]-3,4,5-trihydroxyoxan-2-yl]methyl acetate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8071 80.71%
Caco-2 - 0.8709 87.09%
Blood Brain Barrier - 0.5500 55.00%
Human oral bioavailability - 0.7000 70.00%
Subcellular localzation Mitochondria 0.8928 89.28%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.7926 79.26%
OATP1B3 inhibitior - 0.2759 27.59%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.5276 52.76%
BSEP inhibitior + 0.9023 90.23%
P-glycoprotein inhibitior + 0.7680 76.80%
P-glycoprotein substrate + 0.5743 57.43%
CYP3A4 substrate + 0.7369 73.69%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8832 88.32%
CYP3A4 inhibition - 0.9493 94.93%
CYP2C9 inhibition - 0.8514 85.14%
CYP2C19 inhibition - 0.9208 92.08%
CYP2D6 inhibition - 0.9477 94.77%
CYP1A2 inhibition - 0.8980 89.80%
CYP2C8 inhibition + 0.6793 67.93%
CYP inhibitory promiscuity - 0.9340 93.40%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.5959 59.59%
Eye corrosion - 0.9896 98.96%
Eye irritation - 0.9051 90.51%
Skin irritation - 0.5561 55.61%
Skin corrosion - 0.9385 93.85%
Ames mutagenesis - 0.7000 70.00%
Human Ether-a-go-go-Related Gene inhibition - 0.3609 36.09%
Micronuclear - 0.7800 78.00%
Hepatotoxicity - 0.6874 68.74%
skin sensitisation - 0.9009 90.09%
Respiratory toxicity - 0.5222 52.22%
Reproductive toxicity + 0.9222 92.22%
Mitochondrial toxicity + 0.5375 53.75%
Nephrotoxicity - 0.9122 91.22%
Acute Oral Toxicity (c) III 0.6199 61.99%
Estrogen receptor binding + 0.7918 79.18%
Androgen receptor binding + 0.7313 73.13%
Thyroid receptor binding + 0.5348 53.48%
Glucocorticoid receptor binding + 0.7918 79.18%
Aromatase binding + 0.6253 62.53%
PPAR gamma + 0.8132 81.32%
Honey bee toxicity - 0.6588 65.88%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity - 0.5555 55.55%
Fish aquatic toxicity + 0.9863 98.63%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 98.65% 94.45%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.16% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.48% 96.09%
CHEMBL253 P34972 Cannabinoid CB2 receptor 95.16% 97.25%
CHEMBL221 P23219 Cyclooxygenase-1 93.54% 90.17%
CHEMBL2581 P07339 Cathepsin D 92.58% 98.95%
CHEMBL3137262 O60341 LSD1/CoREST complex 90.37% 97.09%
CHEMBL1806 P11388 DNA topoisomerase II alpha 88.91% 89.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 88.69% 95.89%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 88.52% 95.56%
CHEMBL1951 P21397 Monoamine oxidase A 88.18% 91.49%
CHEMBL5255 O00206 Toll-like receptor 4 88.05% 92.50%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 87.67% 92.62%
CHEMBL1994 P08235 Mineralocorticoid receptor 87.16% 100.00%
CHEMBL5028 O14672 ADAM10 85.41% 97.50%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 83.63% 93.00%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 83.07% 94.33%
CHEMBL1293249 Q13887 Kruppel-like factor 5 83.02% 86.33%
CHEMBL4227 P25090 Lipoxin A4 receptor 82.90% 100.00%
CHEMBL3475 P05121 Plasminogen activator inhibitor-1 82.75% 83.00%
CHEMBL3359 P21462 Formyl peptide receptor 1 81.86% 93.56%
CHEMBL218 P21554 Cannabinoid CB1 receptor 81.33% 96.61%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 81.32% 91.07%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 81.27% 96.47%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 81.21% 95.50%
CHEMBL3922 P50579 Methionine aminopeptidase 2 81.10% 97.28%
CHEMBL1821 P08173 Muscarinic acetylcholine receptor M4 80.89% 94.08%
CHEMBL3714130 P46095 G-protein coupled receptor 6 80.85% 97.36%
CHEMBL3430907 Q96GD4 Aurora kinase B/Inner centromere protein 80.84% 97.50%
CHEMBL4051 P13569 Cystic fibrosis transmembrane conductance regulator 80.55% 95.71%
CHEMBL2842 P42345 Serine/threonine-protein kinase mTOR 80.17% 92.78%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

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PubChem 163048459
LOTUS LTS0111547
wikiData Q105035905