Methyl 4a-hydroxy-7-(hydroxymethyl)-1-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-5,7a-dihydro-1H-cyclopenta[c]pyran-4-carboxylate

Details

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Internal ID f67f3134-c8bd-4363-809e-3a2a575d723c
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Iridoid O-glycosides
IUPAC Name methyl 4a-hydroxy-7-(hydroxymethyl)-1-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-5,7a-dihydro-1H-cyclopenta[c]pyran-4-carboxylate
SMILES (Canonical) COC(=O)C1=COC(C2C1(CC=C2CO)O)OC3C(C(C(C(O3)CO)O)O)O
SMILES (Isomeric) COC(=O)C1=COC(C2C1(CC=C2CO)O)OC3C(C(C(C(O3)CO)O)O)O
InChI InChI=1S/C17H24O11/c1-25-14(23)8-6-26-15(10-7(4-18)2-3-17(8,10)24)28-16-13(22)12(21)11(20)9(5-19)27-16/h2,6,9-13,15-16,18-22,24H,3-5H2,1H3
InChI Key LDBMLOLBWUOZGG-UHFFFAOYSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C17H24O11
Molecular Weight 404.40 g/mol
Exact Mass 404.13186158 g/mol
Topological Polar Surface Area (TPSA) 175.00 Ų
XlogP -2.90
Atomic LogP (AlogP) -3.11
H-Bond Acceptor 11
H-Bond Donor 6
Rotatable Bonds 5

Synonyms

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B0005-175626
Methyl 4a-hydroxy-7-(hydroxymethyl)-1-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-5,7a-dihydro-1H-cyclopenta[c]pyran-4-carboxylate

2D Structure

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2D Structure of Methyl 4a-hydroxy-7-(hydroxymethyl)-1-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-5,7a-dihydro-1H-cyclopenta[c]pyran-4-carboxylate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.5830 58.30%
Caco-2 - 0.8544 85.44%
Blood Brain Barrier - 0.6000 60.00%
Human oral bioavailability - 0.8429 84.29%
Subcellular localzation Mitochondria 0.7181 71.81%
OATP2B1 inhibitior - 0.8604 86.04%
OATP1B1 inhibitior + 0.8174 81.74%
OATP1B3 inhibitior + 0.9561 95.61%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.9250 92.50%
BSEP inhibitior - 0.8835 88.35%
P-glycoprotein inhibitior - 0.8901 89.01%
P-glycoprotein substrate - 0.7685 76.85%
CYP3A4 substrate + 0.6404 64.04%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8627 86.27%
CYP3A4 inhibition - 0.9781 97.81%
CYP2C9 inhibition - 0.9398 93.98%
CYP2C19 inhibition - 0.8545 85.45%
CYP2D6 inhibition - 0.9105 91.05%
CYP1A2 inhibition - 0.9150 91.50%
CYP2C8 inhibition - 0.6998 69.98%
CYP inhibitory promiscuity - 0.9294 92.94%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.6510 65.10%
Eye corrosion - 0.9888 98.88%
Eye irritation - 0.9610 96.10%
Skin irritation - 0.7602 76.02%
Skin corrosion - 0.9511 95.11%
Ames mutagenesis - 0.5100 51.00%
Human Ether-a-go-go-Related Gene inhibition - 0.6002 60.02%
Micronuclear - 0.8100 81.00%
Hepatotoxicity - 0.7699 76.99%
skin sensitisation - 0.8663 86.63%
Respiratory toxicity + 0.5889 58.89%
Reproductive toxicity + 0.8556 85.56%
Mitochondrial toxicity + 0.5375 53.75%
Nephrotoxicity + 0.4684 46.84%
Acute Oral Toxicity (c) III 0.3747 37.47%
Estrogen receptor binding - 0.5427 54.27%
Androgen receptor binding + 0.5545 55.45%
Thyroid receptor binding - 0.5889 58.89%
Glucocorticoid receptor binding - 0.5148 51.48%
Aromatase binding + 0.7150 71.50%
PPAR gamma - 0.5645 56.45%
Honey bee toxicity - 0.8093 80.93%
Biodegradation - 0.6250 62.50%
Crustacea aquatic toxicity - 0.7300 73.00%
Fish aquatic toxicity - 0.3706 37.06%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.75% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.03% 96.09%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 92.57% 94.45%
CHEMBL218 P21554 Cannabinoid CB1 receptor 90.21% 96.61%
CHEMBL2581 P07339 Cathepsin D 87.51% 98.95%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 86.71% 96.00%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 85.57% 91.24%
CHEMBL3401 O75469 Pregnane X receptor 84.87% 94.73%
CHEMBL3137262 O60341 LSD1/CoREST complex 82.61% 97.09%
CHEMBL253 P34972 Cannabinoid CB2 receptor 82.48% 97.25%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 81.41% 94.33%
CHEMBL226 P30542 Adenosine A1 receptor 80.51% 95.93%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 80.44% 94.00%
CHEMBL5028 O14672 ADAM10 80.38% 97.50%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Amphilophium crucigerum
Cerbera manghas
Recordia reitzii

Cross-Links

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PubChem 12443420
LOTUS LTS0054720
wikiData Q105150142