(2S,3S,4S,5R,6R)-6-[[(3S,4S,4aR,6aR,6bS,8R,8aR,9R,10R,12aS,14aR,14bR)-8-hydroxy-8a-(hydroxymethyl)-4-methoxycarbonyl-4,6a,6b,11,11,14b-hexamethyl-10-(2-methylbut-2-enoyloxy)-9-[(Z)-2-methylbut-2-enoyl]oxy-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-3,5-dihydroxy-4-[(2S,3R,4S,5S)-3,4,5-trihydroxyoxan-2-yl]oxyoxane-2-carboxylic acid

Details

Top
Internal ID 2495c842-28fc-4b7c-b54c-f0938f61fa4c
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Triterpene glycosides > Triterpene saponins
IUPAC Name (2S,3S,4S,5R,6R)-6-[[(3S,4S,4aR,6aR,6bS,8R,8aR,9R,10R,12aS,14aR,14bR)-8-hydroxy-8a-(hydroxymethyl)-4-methoxycarbonyl-4,6a,6b,11,11,14b-hexamethyl-10-(2-methylbut-2-enoyloxy)-9-[(Z)-2-methylbut-2-enoyl]oxy-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-3,5-dihydroxy-4-[(2S,3R,4S,5S)-3,4,5-trihydroxyoxan-2-yl]oxyoxane-2-carboxylic acid
SMILES (Canonical) CC=C(C)C(=O)OC1C(C2(C(CC1(C)C)C3=CCC4C5(CCC(C(C5CCC4(C3(CC2O)C)C)(C)C(=O)OC)OC6C(C(C(C(O6)C(=O)O)O)OC7C(C(C(CO7)O)O)O)O)C)CO)OC(=O)C(=CC)C
SMILES (Isomeric) C/C=C(/C)\C(=O)O[C@H]1[C@@H](C(C[C@@H]2[C@]1([C@@H](C[C@@]3(C2=CC[C@H]4[C@]3(CC[C@@H]5[C@@]4(CC[C@@H]([C@@]5(C)C(=O)OC)O[C@H]6[C@@H]([C@H]([C@@H]([C@H](O6)C(=O)O)O)O[C@H]7[C@@H]([C@H]([C@H](CO7)O)O)O)O)C)C)C)O)CO)(C)C)OC(=O)C(=CC)C
InChI InChI=1S/C52H78O19/c1-12-24(3)42(62)70-39-40(71-43(63)25(4)13-2)52(23-53)27(20-47(39,5)6)26-14-15-29-48(7)18-17-32(51(10,46(64)65-11)30(48)16-19-49(29,8)50(26,9)21-31(52)55)67-45-36(59)37(35(58)38(69-45)41(60)61)68-44-34(57)33(56)28(54)22-66-44/h12-14,27-40,44-45,53-59H,15-23H2,1-11H3,(H,60,61)/b24-12?,25-13-/t27-,28-,29+,30+,31+,32-,33-,34+,35-,36+,37-,38-,39-,40-,44-,45+,48+,49+,50+,51-,52-/m0/s1
InChI Key KUGYOOSOCMQUAK-BDLIFLARSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

Top
Molecular Formula C52H78O19
Molecular Weight 1007.20 g/mol
Exact Mass 1006.51373025 g/mol
Topological Polar Surface Area (TPSA) 295.00 Ų
XlogP 4.30
Atomic LogP (AlogP) 2.62
H-Bond Acceptor 18
H-Bond Donor 8
Rotatable Bonds 11

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of (2S,3S,4S,5R,6R)-6-[[(3S,4S,4aR,6aR,6bS,8R,8aR,9R,10R,12aS,14aR,14bR)-8-hydroxy-8a-(hydroxymethyl)-4-methoxycarbonyl-4,6a,6b,11,11,14b-hexamethyl-10-(2-methylbut-2-enoyloxy)-9-[(Z)-2-methylbut-2-enoyl]oxy-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-3,5-dihydroxy-4-[(2S,3R,4S,5S)-3,4,5-trihydroxyoxan-2-yl]oxyoxane-2-carboxylic acid

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7524 75.24%
Caco-2 - 0.8658 86.58%
Blood Brain Barrier - 0.5500 55.00%
Human oral bioavailability - 0.6714 67.14%
Subcellular localzation Mitochondria 0.8446 84.46%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.7990 79.90%
OATP1B3 inhibitior - 0.3173 31.73%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.5500 55.00%
BSEP inhibitior + 0.9321 93.21%
P-glycoprotein inhibitior + 0.7517 75.17%
P-glycoprotein substrate + 0.5703 57.03%
CYP3A4 substrate + 0.7397 73.97%
CYP2C9 substrate - 0.8018 80.18%
CYP2D6 substrate - 0.8966 89.66%
CYP3A4 inhibition - 0.8504 85.04%
CYP2C9 inhibition - 0.8702 87.02%
CYP2C19 inhibition - 0.9017 90.17%
CYP2D6 inhibition - 0.9473 94.73%
CYP1A2 inhibition - 0.9011 90.11%
CYP2C8 inhibition + 0.7779 77.79%
CYP inhibitory promiscuity - 0.9771 97.71%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.5934 59.34%
Eye corrosion - 0.9888 98.88%
Eye irritation - 0.9003 90.03%
Skin irritation - 0.6306 63.06%
Skin corrosion - 0.9434 94.34%
Ames mutagenesis - 0.6748 67.48%
Human Ether-a-go-go-Related Gene inhibition + 0.6918 69.18%
Micronuclear - 0.7700 77.00%
Hepatotoxicity - 0.7069 70.69%
skin sensitisation - 0.8954 89.54%
Respiratory toxicity + 0.5333 53.33%
Reproductive toxicity + 0.9222 92.22%
Mitochondrial toxicity - 0.6125 61.25%
Nephrotoxicity - 0.5577 55.77%
Acute Oral Toxicity (c) III 0.7499 74.99%
Estrogen receptor binding + 0.7422 74.22%
Androgen receptor binding + 0.7552 75.52%
Thyroid receptor binding + 0.6036 60.36%
Glucocorticoid receptor binding + 0.8020 80.20%
Aromatase binding + 0.6289 62.89%
PPAR gamma + 0.8286 82.86%
Honey bee toxicity - 0.6622 66.22%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity - 0.5600 56.00%
Fish aquatic toxicity + 0.9235 92.35%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.08% 91.11%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 97.01% 94.45%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.44% 96.09%
CHEMBL221 P23219 Cyclooxygenase-1 90.97% 90.17%
CHEMBL1293249 Q13887 Kruppel-like factor 5 90.72% 86.33%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 90.50% 91.07%
CHEMBL5608 Q16288 NT-3 growth factor receptor 87.84% 95.89%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 87.50% 94.33%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 87.37% 95.56%
CHEMBL2581 P07339 Cathepsin D 85.26% 98.95%
CHEMBL5028 O14672 ADAM10 85.13% 97.50%
CHEMBL3060 Q9Y345 Glycine transporter 2 85.12% 99.17%
CHEMBL2563 Q9UQL6 Histone deacetylase 5 85.05% 89.67%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 84.46% 95.50%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 83.40% 92.62%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 83.22% 95.50%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 83.21% 97.14%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 82.81% 93.00%
CHEMBL1994 P08235 Mineralocorticoid receptor 81.64% 100.00%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 80.63% 96.90%
CHEMBL1806 P11388 DNA topoisomerase II alpha 80.13% 89.00%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Polyspora chrysandra

Cross-Links

Top
PubChem 163043697
LOTUS LTS0125110
wikiData Q105146141