5-hydroxy-3-(6-methoxy-1,3-benzodioxol-5-yl)-7-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxychromen-4-one

Details

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Internal ID 9600e210-76ff-426d-a31b-2839b11b3e4c
Taxonomy Phenylpropanoids and polyketides > Isoflavonoids > Isoflavonoid O-glycosides
IUPAC Name 5-hydroxy-3-(6-methoxy-1,3-benzodioxol-5-yl)-7-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxychromen-4-one
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C23H22O12/c1-30-13-5-15-14(32-8-33-15)4-10(13)11-7-31-16-3-9(2-12(25)18(16)19(11)26)34-23-22(29)21(28)20(27)17(6-24)35-23/h2-5,7,17,20-25,27-29H,6,8H2,1H3/t17-,20-,21+,22-,23-/m1/s1
InChI Key VFTOZYXPHGOMKE-LDBVRRDLSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C23H22O12
Molecular Weight 490.40 g/mol
Exact Mass 490.11112613 g/mol
Topological Polar Surface Area (TPSA) 174.00 Ų
XlogP 1.00
Atomic LogP (AlogP) 0.08
H-Bond Acceptor 12
H-Bond Donor 5
Rotatable Bonds 5

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of 5-hydroxy-3-(6-methoxy-1,3-benzodioxol-5-yl)-7-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxychromen-4-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6191 61.91%
Caco-2 - 0.8852 88.52%
Blood Brain Barrier - 0.7250 72.50%
Human oral bioavailability - 0.7714 77.14%
Subcellular localzation Mitochondria 0.6374 63.74%
OATP2B1 inhibitior - 0.5576 55.76%
OATP1B1 inhibitior + 0.9266 92.66%
OATP1B3 inhibitior + 0.9728 97.28%
MATE1 inhibitior - 0.8400 84.00%
OCT2 inhibitior - 0.8500 85.00%
BSEP inhibitior - 0.5000 50.00%
P-glycoprotein inhibitior - 0.5378 53.78%
P-glycoprotein substrate - 0.7313 73.13%
CYP3A4 substrate + 0.6450 64.50%
CYP2C9 substrate - 0.8485 84.85%
CYP2D6 substrate - 0.8501 85.01%
CYP3A4 inhibition - 0.5836 58.36%
CYP2C9 inhibition - 0.7784 77.84%
CYP2C19 inhibition - 0.7015 70.15%
CYP2D6 inhibition - 0.8616 86.16%
CYP1A2 inhibition - 0.9048 90.48%
CYP2C8 inhibition + 0.4655 46.55%
CYP inhibitory promiscuity + 0.6208 62.08%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.5596 55.96%
Eye corrosion - 0.9899 98.99%
Eye irritation - 0.8855 88.55%
Skin irritation - 0.8137 81.37%
Skin corrosion - 0.9475 94.75%
Ames mutagenesis - 0.5200 52.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6702 67.02%
Micronuclear + 0.7033 70.33%
Hepatotoxicity - 0.7625 76.25%
skin sensitisation - 0.8847 88.47%
Respiratory toxicity + 0.5556 55.56%
Reproductive toxicity + 0.8667 86.67%
Mitochondrial toxicity + 0.7125 71.25%
Nephrotoxicity + 0.5698 56.98%
Acute Oral Toxicity (c) III 0.7562 75.62%
Estrogen receptor binding + 0.8268 82.68%
Androgen receptor binding + 0.5561 55.61%
Thyroid receptor binding + 0.5412 54.12%
Glucocorticoid receptor binding + 0.6809 68.09%
Aromatase binding + 0.5703 57.03%
PPAR gamma + 0.7579 75.79%
Honey bee toxicity - 0.7398 73.98%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity - 0.5649 56.49%
Fish aquatic toxicity + 0.7290 72.90%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.64% 91.11%
CHEMBL2581 P07339 Cathepsin D 97.68% 98.95%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 95.77% 85.14%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 95.56% 96.77%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 95.52% 96.21%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 94.95% 95.56%
CHEMBL1806 P11388 DNA topoisomerase II alpha 94.83% 89.00%
CHEMBL3137262 O60341 LSD1/CoREST complex 93.93% 97.09%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 93.56% 96.09%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 92.95% 94.00%
CHEMBL3714130 P46095 G-protein coupled receptor 6 92.38% 97.36%
CHEMBL3060 Q9Y345 Glycine transporter 2 89.76% 99.17%
CHEMBL1293249 Q13887 Kruppel-like factor 5 89.00% 86.33%
CHEMBL4208 P20618 Proteasome component C5 88.61% 90.00%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 88.35% 92.62%
CHEMBL5608 Q16288 NT-3 growth factor receptor 86.39% 95.89%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 84.50% 96.00%
CHEMBL4481 P35228 Nitric oxide synthase, inducible 83.42% 94.80%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 82.36% 99.23%
CHEMBL5311 P37023 Serine/threonine-protein kinase receptor R3 82.09% 82.67%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Retama sphaerocarpa

Cross-Links

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PubChem 162954492
LOTUS LTS0158282
wikiData Q105285592