3-[[(2R,3S,4S,5R,6S)-6-[(2R,3R,4S,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)-2-[[(3S,8R,10R)-12-hydroxy-4,4,8,10,14-pentamethyl-17-[6-methyl-2-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-[[(2R,3R,4R,5S,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxymethyl]oxan-2-yl]oxyhept-5-en-2-yl]-2,3,5,6,7,9,11,12,13,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-3-yl]oxy]oxan-3-yl]oxy-3,4,5-trihydroxyoxan-2-yl]methoxy]-3-oxopropanoic acid

Details

Top
Internal ID 8a1230af-475b-4d77-b36a-09d5327d3b96
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Triterpenoids
IUPAC Name 3-[[(2R,3S,4S,5R,6S)-6-[(2R,3R,4S,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)-2-[[(3S,8R,10R)-12-hydroxy-4,4,8,10,14-pentamethyl-17-[6-methyl-2-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-[[(2R,3R,4R,5S,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxymethyl]oxan-2-yl]oxyhept-5-en-2-yl]-2,3,5,6,7,9,11,12,13,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-3-yl]oxy]oxan-3-yl]oxy-3,4,5-trihydroxyoxan-2-yl]methoxy]-3-oxopropanoic acid
SMILES (Canonical) CC1C(C(C(C(O1)OCC2C(C(C(C(O2)OC(C)(CCC=C(C)C)C3CCC4(C3C(CC5C4(CCC6C5(CCC(C6(C)C)OC7C(C(C(C(O7)CO)O)O)OC8C(C(C(C(O8)COC(=O)CC(=O)O)O)O)O)C)C)O)C)O)O)O)O)O)O
SMILES (Isomeric) C[C@H]1[C@H]([C@H]([C@H]([C@@H](O1)OC[C@@H]2[C@H]([C@@H]([C@H]([C@@H](O2)OC(C)(CCC=C(C)C)C3CCC4(C3C(CC5[C@]4(CCC6[C@@]5(CC[C@@H](C6(C)C)O[C@H]7[C@@H]([C@H]([C@@H]([C@H](O7)CO)O)O)O[C@H]8[C@@H]([C@H]([C@@H]([C@H](O8)COC(=O)CC(=O)O)O)O)O)C)C)O)C)O)O)O)O)O)O
InChI InChI=1S/C57H94O25/c1-24(2)11-10-15-57(9,82-51-47(73)43(69)40(66)30(79-51)23-75-49-45(71)41(67)37(63)25(3)76-49)26-12-17-56(8)36(26)27(59)19-32-54(6)16-14-33(53(4,5)31(54)13-18-55(32,56)7)80-52-48(44(70)38(64)28(21-58)77-52)81-50-46(72)42(68)39(65)29(78-50)22-74-35(62)20-34(60)61/h11,25-33,36-52,58-59,63-73H,10,12-23H2,1-9H3,(H,60,61)/t25-,26?,27?,28+,29+,30+,31?,32?,33-,36?,37+,38+,39+,40+,41+,42-,43-,44-,45+,46+,47+,48+,49+,50-,51-,52-,54-,55+,56?,57?/m0/s1
InChI Key DBGMBTZQBJWAQO-DYDRFSEASA-N
Popularity 0 references in papers

Physical and Chemical Properties

Top
Molecular Formula C57H94O25
Molecular Weight 1179.30 g/mol
Exact Mass 1178.60841848 g/mol
Topological Polar Surface Area (TPSA) 400.00 Ų
XlogP 0.50
Atomic LogP (AlogP) -1.15
H-Bond Acceptor 24
H-Bond Donor 14
Rotatable Bonds 18

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of 3-[[(2R,3S,4S,5R,6S)-6-[(2R,3R,4S,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)-2-[[(3S,8R,10R)-12-hydroxy-4,4,8,10,14-pentamethyl-17-[6-methyl-2-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-[[(2R,3R,4R,5S,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxymethyl]oxan-2-yl]oxyhept-5-en-2-yl]-2,3,5,6,7,9,11,12,13,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-3-yl]oxy]oxan-3-yl]oxy-3,4,5-trihydroxyoxan-2-yl]methoxy]-3-oxopropanoic acid

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7431 74.31%
Caco-2 - 0.8819 88.19%
Blood Brain Barrier - 0.5000 50.00%
Human oral bioavailability - 0.8286 82.86%
Subcellular localzation Mitochondria 0.8360 83.60%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.7879 78.79%
OATP1B3 inhibitior + 0.8203 82.03%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.5776 57.76%
BSEP inhibitior + 0.9515 95.15%
P-glycoprotein inhibitior + 0.7458 74.58%
P-glycoprotein substrate + 0.5000 50.00%
CYP3A4 substrate + 0.7416 74.16%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8862 88.62%
CYP3A4 inhibition - 0.8860 88.60%
CYP2C9 inhibition - 0.8463 84.63%
CYP2C19 inhibition - 0.9234 92.34%
CYP2D6 inhibition - 0.9476 94.76%
CYP1A2 inhibition - 0.9169 91.69%
CYP2C8 inhibition + 0.7543 75.43%
CYP inhibitory promiscuity - 0.9609 96.09%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.6365 63.65%
Eye corrosion - 0.9908 99.08%
Eye irritation - 0.8989 89.89%
Skin irritation - 0.5364 53.64%
Skin corrosion - 0.9432 94.32%
Ames mutagenesis - 0.7424 74.24%
Human Ether-a-go-go-Related Gene inhibition + 0.7772 77.72%
Micronuclear - 0.8000 80.00%
Hepatotoxicity + 0.5892 58.92%
skin sensitisation - 0.9102 91.02%
Respiratory toxicity + 0.5333 53.33%
Reproductive toxicity + 0.9111 91.11%
Mitochondrial toxicity + 0.5375 53.75%
Nephrotoxicity - 0.7738 77.38%
Acute Oral Toxicity (c) III 0.5258 52.58%
Estrogen receptor binding + 0.7744 77.44%
Androgen receptor binding + 0.7435 74.35%
Thyroid receptor binding + 0.5950 59.50%
Glucocorticoid receptor binding + 0.7852 78.52%
Aromatase binding + 0.6635 66.35%
PPAR gamma + 0.8251 82.51%
Honey bee toxicity - 0.5806 58.06%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.5100 51.00%
Fish aquatic toxicity + 0.9586 95.86%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.23% 91.11%
CHEMBL3714130 P46095 G-protein coupled receptor 6 95.28% 97.36%
CHEMBL1293249 Q13887 Kruppel-like factor 5 94.85% 86.33%
CHEMBL218 P21554 Cannabinoid CB1 receptor 93.24% 96.61%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 92.95% 96.09%
CHEMBL253 P34972 Cannabinoid CB2 receptor 91.88% 97.25%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 90.89% 95.50%
CHEMBL3137262 O60341 LSD1/CoREST complex 90.27% 97.09%
CHEMBL5028 O14672 ADAM10 89.09% 97.50%
CHEMBL5255 O00206 Toll-like receptor 4 88.45% 92.50%
CHEMBL1806 P11388 DNA topoisomerase II alpha 88.07% 89.00%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 87.84% 96.90%
CHEMBL2581 P07339 Cathepsin D 87.75% 98.95%
CHEMBL4227 P25090 Lipoxin A4 receptor 87.68% 100.00%
CHEMBL226 P30542 Adenosine A1 receptor 86.93% 95.93%
CHEMBL3060 Q9Y345 Glycine transporter 2 85.83% 99.17%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 84.91% 95.83%
CHEMBL5608 Q16288 NT-3 growth factor receptor 84.67% 95.89%
CHEMBL221 P23219 Cyclooxygenase-1 84.12% 90.17%
CHEMBL340 P08684 Cytochrome P450 3A4 83.94% 91.19%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 83.75% 94.33%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 82.65% 91.24%
CHEMBL1994 P08235 Mineralocorticoid receptor 82.56% 100.00%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 81.96% 93.04%
CHEMBL2413 P32246 C-C chemokine receptor type 1 81.45% 89.50%
CHEMBL5888 Q99558 Mitogen-activated protein kinase kinase kinase 14 81.37% 100.00%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 81.03% 95.89%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 80.67% 93.00%
CHEMBL1914 P06276 Butyrylcholinesterase 80.49% 95.00%
CHEMBL3430907 Q96GD4 Aurora kinase B/Inner centromere protein 80.12% 97.50%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Gynostemma pentaphyllum

Cross-Links

Top
PubChem 24893634
NPASS NPC206537