16-[5-[3-[3,5-Dihydroxy-6-(hydroxymethyl)-4-(3,4,5-trihydroxyoxan-2-yl)oxyoxan-2-yl]oxy-5-hydroxy-6-(hydroxymethyl)-4-(3,4,5-trihydroxyoxan-2-yl)oxyoxan-2-yl]oxy-3,4-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-10-one

Details

Top
Internal ID 8f5cd2b6-c9a1-48b2-8620-d1576e524b7a
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name 16-[5-[3-[3,5-dihydroxy-6-(hydroxymethyl)-4-(3,4,5-trihydroxyoxan-2-yl)oxyoxan-2-yl]oxy-5-hydroxy-6-(hydroxymethyl)-4-(3,4,5-trihydroxyoxan-2-yl)oxyoxan-2-yl]oxy-3,4-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-10-one
SMILES (Canonical) CC1CCC2(C(C3C(O2)CC4C3(C(=O)CC5C4CCC6C5(CCC(C6)OC7C(C(C(C(O7)CO)OC8C(C(C(C(O8)CO)O)OC9C(C(C(CO9)O)O)O)OC2C(C(C(C(O2)CO)O)OC2C(C(C(CO2)O)O)O)O)O)O)C)C)C)OC1
SMILES (Isomeric) CC1CCC2(C(C3C(O2)CC4C3(C(=O)CC5C4CCC6C5(CCC(C6)OC7C(C(C(C(O7)CO)OC8C(C(C(C(O8)CO)O)OC9C(C(C(CO9)O)O)O)OC2C(C(C(C(O2)CO)O)OC2C(C(C(CO2)O)O)O)O)O)O)C)C)C)OC1
InChI InChI=1S/C55H88O27/c1-20-7-10-55(73-17-20)21(2)34-29(82-55)12-26-24-6-5-22-11-23(8-9-53(22,3)25(24)13-33(61)54(26,34)4)74-50-42(69)39(66)44(32(16-58)77-50)78-52-47(46(38(65)31(15-57)76-52)80-49-41(68)36(63)28(60)19-72-49)81-51-43(70)45(37(64)30(14-56)75-51)79-48-40(67)35(62)27(59)18-71-48/h20-32,34-52,56-60,62-70H,5-19H2,1-4H3
InChI Key VRHRSSKYXDMEDI-UHFFFAOYSA-N
Popularity 0 references in papers

Physical and Chemical Properties

Top
Molecular Formula C55H88O27
Molecular Weight 1181.30 g/mol
Exact Mass 1180.55129753 g/mol
Topological Polar Surface Area (TPSA) 411.00 Ų
XlogP -3.60
Atomic LogP (AlogP) -4.63
H-Bond Acceptor 27
H-Bond Donor 14
Rotatable Bonds 13

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of 16-[5-[3-[3,5-Dihydroxy-6-(hydroxymethyl)-4-(3,4,5-trihydroxyoxan-2-yl)oxyoxan-2-yl]oxy-5-hydroxy-6-(hydroxymethyl)-4-(3,4,5-trihydroxyoxan-2-yl)oxyoxan-2-yl]oxy-3,4-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-10-one

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.5734 57.34%
Caco-2 - 0.8743 87.43%
Blood Brain Barrier - 0.7000 70.00%
Human oral bioavailability - 0.7143 71.43%
Subcellular localzation Mitochondria 0.7299 72.99%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8782 87.82%
OATP1B3 inhibitior + 0.9419 94.19%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.5000 50.00%
BSEP inhibitior + 0.8496 84.96%
P-glycoprotein inhibitior + 0.7416 74.16%
P-glycoprotein substrate + 0.5773 57.73%
CYP3A4 substrate + 0.7479 74.79%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8483 84.83%
CYP3A4 inhibition - 0.9265 92.65%
CYP2C9 inhibition - 0.9261 92.61%
CYP2C19 inhibition - 0.9124 91.24%
CYP2D6 inhibition - 0.9583 95.83%
CYP1A2 inhibition - 0.9264 92.64%
CYP2C8 inhibition + 0.6560 65.60%
CYP inhibitory promiscuity - 0.9693 96.93%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.6417 64.17%
Eye corrosion - 0.9922 99.22%
Eye irritation - 0.9024 90.24%
Skin irritation - 0.6168 61.68%
Skin corrosion - 0.9490 94.90%
Ames mutagenesis - 0.7654 76.54%
Human Ether-a-go-go-Related Gene inhibition + 0.8197 81.97%
Micronuclear - 0.9100 91.00%
Hepatotoxicity - 0.8000 80.00%
skin sensitisation - 0.9422 94.22%
Respiratory toxicity + 0.8111 81.11%
Reproductive toxicity + 0.7444 74.44%
Mitochondrial toxicity - 0.5250 52.50%
Nephrotoxicity - 0.7282 72.82%
Acute Oral Toxicity (c) I 0.7641 76.41%
Estrogen receptor binding + 0.8739 87.39%
Androgen receptor binding + 0.7343 73.43%
Thyroid receptor binding + 0.5512 55.12%
Glucocorticoid receptor binding + 0.6795 67.95%
Aromatase binding + 0.6373 63.73%
PPAR gamma + 0.7935 79.35%
Honey bee toxicity - 0.5587 55.87%
Biodegradation - 0.7000 70.00%
Crustacea aquatic toxicity + 0.5200 52.00%
Fish aquatic toxicity + 0.8173 81.73%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.23% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.03% 96.09%
CHEMBL3137262 O60341 LSD1/CoREST complex 95.93% 97.09%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 91.72% 94.45%
CHEMBL1994 P08235 Mineralocorticoid receptor 90.63% 100.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 89.29% 86.33%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 88.95% 91.24%
CHEMBL5255 O00206 Toll-like receptor 4 88.51% 92.50%
CHEMBL241 Q14432 Phosphodiesterase 3A 86.92% 92.94%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 84.66% 95.50%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 84.61% 93.04%
CHEMBL233 P35372 Mu opioid receptor 83.87% 97.93%
CHEMBL237 P41145 Kappa opioid receptor 83.63% 98.10%
CHEMBL3430907 Q96GD4 Aurora kinase B/Inner centromere protein 82.70% 97.50%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 82.34% 96.77%
CHEMBL253 P34972 Cannabinoid CB2 receptor 82.01% 97.25%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 81.88% 100.00%
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 81.83% 97.29%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 81.23% 94.00%
CHEMBL218 P21554 Cannabinoid CB1 receptor 81.19% 96.61%
CHEMBL1937 Q92769 Histone deacetylase 2 80.81% 94.75%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 80.79% 82.69%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 80.62% 95.83%
CHEMBL1806 P11388 DNA topoisomerase II alpha 80.56% 89.00%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Agave macroacantha

Cross-Links

Top
PubChem 73809138
LOTUS LTS0014843
wikiData Q105291791