2-[[3,16-dihydroxy-17-(1-hydroxyethyl)-10,13-dimethyl-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1H-cyclopenta[a]phenanthren-2-yl]oxy]-6-(hydroxymethyl)oxane-3,4,5-triol

Details

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Internal ID 5f033e4c-2e57-43b4-add7-301ee1a74fba
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides
IUPAC Name 2-[[3,16-dihydroxy-17-(1-hydroxyethyl)-10,13-dimethyl-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1H-cyclopenta[a]phenanthren-2-yl]oxy]-6-(hydroxymethyl)oxane-3,4,5-triol
SMILES (Canonical) CC(C1C(CC2C1(CCC3C2CCC4C3(CC(C(C4)O)OC5C(C(C(C(O5)CO)O)O)O)C)C)O)O
SMILES (Isomeric) CC(C1C(CC2C1(CCC3C2CCC4C3(CC(C(C4)O)OC5C(C(C(C(O5)CO)O)O)O)C)C)O)O
InChI InChI=1S/C27H46O9/c1-12(29)21-18(31)9-16-14-5-4-13-8-17(30)19(10-27(13,3)15(14)6-7-26(16,21)2)35-25-24(34)23(33)22(32)20(11-28)36-25/h12-25,28-34H,4-11H2,1-3H3
InChI Key PYXBSSKCUQRSGO-UHFFFAOYSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C27H46O9
Molecular Weight 514.60 g/mol
Exact Mass 514.31418304 g/mol
Topological Polar Surface Area (TPSA) 160.00 Ų
XlogP 2.00
Atomic LogP (AlogP) 0.15
H-Bond Acceptor 9
H-Bond Donor 7
Rotatable Bonds 4

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of 2-[[3,16-dihydroxy-17-(1-hydroxyethyl)-10,13-dimethyl-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1H-cyclopenta[a]phenanthren-2-yl]oxy]-6-(hydroxymethyl)oxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.5844 58.44%
Caco-2 - 0.8504 85.04%
Blood Brain Barrier - 0.6250 62.50%
Human oral bioavailability - 0.7286 72.86%
Subcellular localzation Mitochondria 0.5952 59.52%
OATP2B1 inhibitior - 0.7228 72.28%
OATP1B1 inhibitior + 0.8731 87.31%
OATP1B3 inhibitior + 0.9168 91.68%
MATE1 inhibitior - 0.9612 96.12%
OCT2 inhibitior - 0.6792 67.92%
BSEP inhibitior - 0.8969 89.69%
P-glycoprotein inhibitior - 0.6477 64.77%
P-glycoprotein substrate - 0.7220 72.20%
CYP3A4 substrate + 0.7259 72.59%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8203 82.03%
CYP3A4 inhibition - 0.8990 89.90%
CYP2C9 inhibition - 0.8931 89.31%
CYP2C19 inhibition - 0.8927 89.27%
CYP2D6 inhibition - 0.9636 96.36%
CYP1A2 inhibition - 0.8394 83.94%
CYP2C8 inhibition - 0.6148 61.48%
CYP inhibitory promiscuity - 0.9550 95.50%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.7412 74.12%
Eye corrosion - 0.9924 99.24%
Eye irritation - 0.9435 94.35%
Skin irritation - 0.6169 61.69%
Skin corrosion - 0.9532 95.32%
Ames mutagenesis - 0.7785 77.85%
Human Ether-a-go-go-Related Gene inhibition + 0.6750 67.50%
Micronuclear - 0.9000 90.00%
Hepatotoxicity - 0.7730 77.30%
skin sensitisation - 0.9402 94.02%
Respiratory toxicity + 0.8222 82.22%
Reproductive toxicity + 0.7667 76.67%
Mitochondrial toxicity + 0.6125 61.25%
Nephrotoxicity - 0.9401 94.01%
Acute Oral Toxicity (c) I 0.5666 56.66%
Estrogen receptor binding + 0.5738 57.38%
Androgen receptor binding + 0.6874 68.74%
Thyroid receptor binding + 0.5565 55.65%
Glucocorticoid receptor binding + 0.5750 57.50%
Aromatase binding + 0.7077 70.77%
PPAR gamma + 0.5416 54.16%
Honey bee toxicity - 0.6480 64.80%
Biodegradation - 0.7000 70.00%
Crustacea aquatic toxicity - 0.7100 71.00%
Fish aquatic toxicity + 0.7909 79.09%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.70% 96.09%
CHEMBL3137262 O60341 LSD1/CoREST complex 96.82% 97.09%
CHEMBL237 P41145 Kappa opioid receptor 94.23% 98.10%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 93.94% 91.11%
CHEMBL253 P34972 Cannabinoid CB2 receptor 93.59% 97.25%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 93.58% 96.38%
CHEMBL226 P30542 Adenosine A1 receptor 93.13% 95.93%
CHEMBL6136 O60341 Lysine-specific histone demethylase 1 93.00% 95.58%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 92.85% 85.14%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 92.07% 94.45%
CHEMBL1994 P08235 Mineralocorticoid receptor 89.84% 100.00%
CHEMBL344 Q99705 Melanin-concentrating hormone receptor 1 88.77% 92.50%
CHEMBL2996 Q05655 Protein kinase C delta 88.40% 97.79%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 87.69% 95.89%
CHEMBL220 P22303 Acetylcholinesterase 87.40% 94.45%
CHEMBL5608 Q16288 NT-3 growth factor receptor 86.98% 95.89%
CHEMBL221 P23219 Cyclooxygenase-1 86.79% 90.17%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 86.16% 96.21%
CHEMBL2094135 Q96BI3 Gamma-secretase 85.71% 98.05%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 85.60% 92.86%
CHEMBL4302 P08183 P-glycoprotein 1 85.09% 92.98%
CHEMBL1907605 P24864 Cyclin-dependent kinase 2/cyclin E1 85.06% 92.88%
CHEMBL2581 P07339 Cathepsin D 84.36% 98.95%
CHEMBL1293316 Q9HBX9 Relaxin receptor 1 84.01% 82.50%
CHEMBL4581 P52732 Kinesin-like protein 1 83.62% 93.18%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 83.61% 97.14%
CHEMBL203 P00533 Epidermal growth factor receptor erbB1 83.37% 97.34%
CHEMBL2007625 O75874 Isocitrate dehydrogenase [NADP] cytoplasmic 82.86% 99.00%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 82.78% 89.05%
CHEMBL5524 Q99873 Protein-arginine N-methyltransferase 1 82.64% 96.67%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 82.55% 95.83%
CHEMBL4227 P25090 Lipoxin A4 receptor 82.48% 100.00%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 81.59% 96.77%
CHEMBL3430907 Q96GD4 Aurora kinase B/Inner centromere protein 80.97% 97.50%
CHEMBL5888 Q99558 Mitogen-activated protein kinase kinase kinase 14 80.47% 100.00%
CHEMBL233 P35372 Mu opioid receptor 80.43% 97.93%
CHEMBL1871 P10275 Androgen Receptor 80.21% 96.43%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Melia azedarach

Cross-Links

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PubChem 14214016
LOTUS LTS0040420
wikiData Q105216831