(2S,3R,4S,5S,6R)-2-[2-[(1S,2R)-1,3-dihydroxy-1-(4-hydroxy-3-methoxyphenyl)propan-2-yl]oxy-5-[(E)-3-hydroxyprop-1-enyl]phenoxy]-6-(hydroxymethyl)oxane-3,4,5-triol

Details

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Internal ID 77cbea41-2b90-4dbc-8d99-2e2808fe483d
Taxonomy Lignans, neolignans and related compounds > Lignan glycosides
IUPAC Name (2S,3R,4S,5S,6R)-2-[2-[(1S,2R)-1,3-dihydroxy-1-(4-hydroxy-3-methoxyphenyl)propan-2-yl]oxy-5-[(E)-3-hydroxyprop-1-enyl]phenoxy]-6-(hydroxymethyl)oxane-3,4,5-triol
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C25H32O12/c1-34-17-10-14(5-6-15(17)29)21(30)19(11-27)35-16-7-4-13(3-2-8-26)9-18(16)36-25-24(33)23(32)22(31)20(12-28)37-25/h2-7,9-10,19-33H,8,11-12H2,1H3/b3-2+/t19-,20-,21+,22-,23+,24-,25-/m1/s1
InChI Key FBDZFMHJAVFQSJ-URZRKHDSSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C25H32O12
Molecular Weight 524.50 g/mol
Exact Mass 524.18937645 g/mol
Topological Polar Surface Area (TPSA) 199.00 Ų
XlogP -0.70
Atomic LogP (AlogP) -0.94
H-Bond Acceptor 12
H-Bond Donor 8
Rotatable Bonds 11

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2S,3R,4S,5S,6R)-2-[2-[(1S,2R)-1,3-dihydroxy-1-(4-hydroxy-3-methoxyphenyl)propan-2-yl]oxy-5-[(E)-3-hydroxyprop-1-enyl]phenoxy]-6-(hydroxymethyl)oxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.7687 76.87%
Caco-2 - 0.8906 89.06%
Blood Brain Barrier - 0.5000 50.00%
Human oral bioavailability - 0.5857 58.57%
Subcellular localzation Mitochondria 0.5647 56.47%
OATP2B1 inhibitior - 0.8538 85.38%
OATP1B1 inhibitior + 0.8679 86.79%
OATP1B3 inhibitior + 0.9778 97.78%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.8250 82.50%
BSEP inhibitior + 0.5684 56.84%
P-glycoprotein inhibitior - 0.4536 45.36%
P-glycoprotein substrate - 0.6547 65.47%
CYP3A4 substrate + 0.5851 58.51%
CYP2C9 substrate - 0.6100 61.00%
CYP2D6 substrate - 0.8073 80.73%
CYP3A4 inhibition - 0.8726 87.26%
CYP2C9 inhibition - 0.8603 86.03%
CYP2C19 inhibition - 0.8011 80.11%
CYP2D6 inhibition - 0.8955 89.55%
CYP1A2 inhibition - 0.8672 86.72%
CYP2C8 inhibition + 0.5340 53.40%
CYP inhibitory promiscuity - 0.5395 53.95%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9600 96.00%
Carcinogenicity (trinary) Non-required 0.6529 65.29%
Eye corrosion - 0.9914 99.14%
Eye irritation - 0.9287 92.87%
Skin irritation - 0.8472 84.72%
Skin corrosion - 0.9502 95.02%
Ames mutagenesis - 0.7300 73.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7342 73.42%
Micronuclear + 0.5359 53.59%
Hepatotoxicity - 0.7571 75.71%
skin sensitisation - 0.8441 84.41%
Respiratory toxicity + 0.5556 55.56%
Reproductive toxicity + 0.5778 57.78%
Mitochondrial toxicity - 0.7000 70.00%
Nephrotoxicity - 0.9031 90.31%
Acute Oral Toxicity (c) III 0.7481 74.81%
Estrogen receptor binding + 0.7693 76.93%
Androgen receptor binding + 0.5675 56.75%
Thyroid receptor binding + 0.5456 54.56%
Glucocorticoid receptor binding - 0.5741 57.41%
Aromatase binding + 0.5667 56.67%
PPAR gamma + 0.6795 67.95%
Honey bee toxicity - 0.8064 80.64%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity - 0.6300 63.00%
Fish aquatic toxicity + 0.7358 73.58%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.64% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.27% 91.11%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 96.87% 96.00%
CHEMBL225 P28335 Serotonin 2c (5-HT2c) receptor 95.98% 89.62%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 95.02% 85.14%
CHEMBL1293249 Q13887 Kruppel-like factor 5 94.29% 86.33%
CHEMBL1806 P11388 DNA topoisomerase II alpha 91.22% 89.00%
CHEMBL3060 Q9Y345 Glycine transporter 2 91.16% 99.17%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 90.03% 95.56%
CHEMBL2581 P07339 Cathepsin D 89.74% 98.95%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 87.83% 99.15%
CHEMBL5608 Q16288 NT-3 growth factor receptor 85.79% 95.89%
CHEMBL4208 P20618 Proteasome component C5 85.74% 90.00%
CHEMBL3194 P02766 Transthyretin 83.50% 90.71%
CHEMBL3401 O75469 Pregnane X receptor 83.39% 94.73%
CHEMBL2335 P42785 Lysosomal Pro-X carboxypeptidase 82.28% 100.00%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 82.02% 86.92%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 81.00% 95.89%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Iodes cirrhosa

Cross-Links

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PubChem 101865084
LOTUS LTS0107015
wikiData Q104992576