Methyl 2,5,7-trihydroxy-2-methyl-6,11-dioxo-4-((2,3,6-trideoxy-4-O-(2,6-dideoxy-4-O-(5-hydroxy-6-methyloxan-2-yl)hexopyranosyl)-3-(dimethylamino)hexopyranosyl)oxy)-1,2,3,4,6,11-hexahydrotetracene-1-carboxylate

Details

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Internal ID 306b04a1-8e7e-446e-8d40-79e99ab15314
Taxonomy Phenylpropanoids and polyketides > Anthracyclines
IUPAC Name methyl (1R,2R,4S)-4-[(2R,4S,6S)-4-(dimethylamino)-5-[(2S,4S,5S,6S)-4-hydroxy-5-[(2S,5R,6S)-5-hydroxy-6-methyloxan-2-yl]oxy-6-methyloxan-2-yl]oxy-6-methyloxan-2-yl]oxy-2,5,7-trihydroxy-2-methyl-6,11-dioxo-3,4-dihydro-1H-tetracene-1-carboxylate
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C41H53NO15/c1-17-24(43)11-12-28(52-17)56-39-19(3)54-30(15-26(39)45)57-38-18(2)53-29(14-23(38)42(5)6)55-27-16-41(4,50)34(40(49)51-7)21-13-22-33(37(48)32(21)27)36(47)31-20(35(22)46)9-8-10-25(31)44/h8-10,13,17-19,23-24,26-30,34,38-39,43-45,48,50H,11-12,14-16H2,1-7H3/t17-,18-,19-,23-,24+,26-,27-,28-,29-,30-,34-,38?,39+,41+/m0/s1
InChI Key WGLYNEPBFANBDP-AXVDPITDSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C41H53NO15
Molecular Weight 799.90 g/mol
Exact Mass 799.34151998 g/mol
Topological Polar Surface Area (TPSA) 220.00 Ų
XlogP 3.30
Atomic LogP (AlogP) 2.56
H-Bond Acceptor 16
H-Bond Donor 5
Rotatable Bonds 8

Synonyms

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83753-72-4
methyl (1R,2R,4S)-4-[(2R,4S,6S)-4-(dimethylamino)-5-[(2S,4S,5S,6S)-4-hydroxy-5-[(2S,5R,6S)-5-hydroxy-6-methyloxan-2-yl]oxy-6-methyloxan-2-yl]oxy-6-methyloxan-2-yl]oxy-2,5,7-trihydroxy-2-methyl-6,11-dioxo-3,4-dihydro-1H-tetracene-1-carboxylate
DTXSID201003790
1-Naphthacenecarboxylic acid, 1,2,3,4,6,11-hexahydro-2,5,7-trihydroxy-2-methyl-6,11-dioxo-4-((2,3,6-trideoxy-4-O-(2,6-dideoxy-4-O-((2S-(2alpha,5alpha,6beta))-tetrahydro-5-hydroxy-6-methyl-2H-pyran-2-yl)-alpha-L-lyxo-hexopyranosyl)-3-(dimethylamino)-alpha-L-lyxo-hexopyranosyl)oxy )-, methyl ester, (1R-(1alpha,2beta,4beta))-
1-Naphthacenecarboxylic acid, 1,2,3,4,6,11-hexahydro-6,11-dioxo-2-methyl-4-((2,3,6-trideoxy-4-(O-(2,6-dideoxy-4-O-((2S-(2-alpha,5-alpha,6-beta))-tetrahydro-5-hydroxy-6-methyl-2H-pyran-2-yl)-alpha-L-lyxo-hexopyranosyl)-3-(dimethylamino)-alpha-lyxo-hexopyranosyl)oxy)-2,5,7-trihydroxy-, methyl ester, (1R-(1-alpha,2-beta,4-beta))-
Methyl 2,5,7-trihydroxy-2-methyl-6,11-dioxo-4-({2,3,6-trideoxy-4-O-[2,6-dideoxy-4-O-(5-hydroxy-6-methyloxan-2-yl)hexopyranosyl]-3-(dimethylamino)hexopyranosyl}oxy)-1,2,3,4,6,11-hexahydrotetracene-1-carboxylate

2D Structure

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2D Structure of Methyl 2,5,7-trihydroxy-2-methyl-6,11-dioxo-4-((2,3,6-trideoxy-4-O-(2,6-dideoxy-4-O-(5-hydroxy-6-methyloxan-2-yl)hexopyranosyl)-3-(dimethylamino)hexopyranosyl)oxy)-1,2,3,4,6,11-hexahydrotetracene-1-carboxylate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7794 77.94%
Caco-2 - 0.8678 86.78%
Blood Brain Barrier - 0.9250 92.50%
Human oral bioavailability - 0.6000 60.00%
Subcellular localzation Mitochondria 0.3947 39.47%
OATP2B1 inhibitior - 0.7160 71.60%
OATP1B1 inhibitior + 0.8774 87.74%
OATP1B3 inhibitior + 0.9218 92.18%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior + 0.5679 56.79%
BSEP inhibitior + 0.7182 71.82%
P-glycoprotein inhibitior + 0.7431 74.31%
P-glycoprotein substrate + 0.8567 85.67%
CYP3A4 substrate + 0.7421 74.21%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8450 84.50%
CYP3A4 inhibition - 0.7908 79.08%
CYP2C9 inhibition - 0.8785 87.85%
CYP2C19 inhibition - 0.8722 87.22%
CYP2D6 inhibition - 0.8142 81.42%
CYP1A2 inhibition - 0.5100 51.00%
CYP2C8 inhibition + 0.5728 57.28%
CYP inhibitory promiscuity - 0.9510 95.10%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9600 96.00%
Carcinogenicity (trinary) Non-required 0.5514 55.14%
Eye corrosion - 0.9895 98.95%
Eye irritation - 0.9094 90.94%
Skin irritation - 0.7897 78.97%
Skin corrosion - 0.9318 93.18%
Ames mutagenesis + 0.8700 87.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4589 45.89%
Micronuclear + 0.5700 57.00%
Hepatotoxicity + 0.7157 71.57%
skin sensitisation - 0.8909 89.09%
Respiratory toxicity + 0.8667 86.67%
Reproductive toxicity + 0.9000 90.00%
Mitochondrial toxicity + 0.9500 95.00%
Nephrotoxicity - 0.6776 67.76%
Acute Oral Toxicity (c) II 0.4556 45.56%
Estrogen receptor binding + 0.8631 86.31%
Androgen receptor binding + 0.8195 81.95%
Thyroid receptor binding + 0.5408 54.08%
Glucocorticoid receptor binding + 0.8260 82.60%
Aromatase binding + 0.7591 75.91%
PPAR gamma + 0.8189 81.89%
Honey bee toxicity - 0.7066 70.66%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity - 0.6000 60.00%
Fish aquatic toxicity + 0.9115 91.15%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.81% 91.11%
CHEMBL2581 P07339 Cathepsin D 99.08% 98.95%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 98.68% 96.38%
CHEMBL1806 P11388 DNA topoisomerase II alpha 98.47% 89.00%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.69% 96.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 95.53% 95.56%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 95.49% 96.21%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 95.44% 85.14%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 94.64% 99.23%
CHEMBL3137262 O60341 LSD1/CoREST complex 93.80% 97.09%
CHEMBL340 P08684 Cytochrome P450 3A4 92.54% 91.19%
CHEMBL1293249 Q13887 Kruppel-like factor 5 91.32% 86.33%
CHEMBL3475 P05121 Plasminogen activator inhibitor-1 89.82% 83.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 89.76% 95.89%
CHEMBL1994 P08235 Mineralocorticoid receptor 88.91% 100.00%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 88.33% 95.83%
CHEMBL241 Q14432 Phosphodiesterase 3A 88.12% 92.94%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 86.11% 97.14%
CHEMBL2345 P51812 Ribosomal protein S6 kinase alpha 3 85.67% 95.64%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 85.45% 94.00%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 84.94% 99.15%
CHEMBL226 P30542 Adenosine A1 receptor 84.87% 95.93%
CHEMBL3359 P21462 Formyl peptide receptor 1 84.54% 93.56%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 84.25% 91.07%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 84.10% 92.62%
CHEMBL1907605 P24864 Cyclin-dependent kinase 2/cyclin E1 83.65% 92.88%
CHEMBL3401 O75469 Pregnane X receptor 83.32% 94.73%
CHEMBL4208 P20618 Proteasome component C5 82.95% 90.00%
CHEMBL1907600 Q00535 Cyclin-dependent kinase 5/CDK5 activator 1 82.08% 93.03%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 81.87% 96.77%
CHEMBL2535 P11166 Glucose transporter 81.81% 98.75%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 81.58% 90.71%
CHEMBL3713062 P10646 Tissue factor pathway inhibitor 81.39% 97.33%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 81.22% 96.00%
CHEMBL2553 Q15418 Ribosomal protein S6 kinase alpha 1 81.02% 85.11%
CHEMBL2378 P30307 Dual specificity phosphatase Cdc25C 80.36% 96.67%
CHEMBL2094127 P06493 Cyclin-dependent kinase 1/cyclin B 80.17% 96.00%
CHEMBL3430907 Q96GD4 Aurora kinase B/Inner centromere protein 80.13% 97.50%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 80.06% 91.24%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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Cross-Links

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PubChem 174333
LOTUS LTS0128883
wikiData Q82998477