Arginomycin

Details

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Internal ID ffbac484-ebfe-4025-a861-700d235c5f65
Taxonomy Organic acids and derivatives > Peptidomimetics > Hybrid peptides
IUPAC Name 3-[[2-amino-5-[carbamimidoyl(methyl)amino]-3-methylpentanoyl]amino]-6-(4-amino-2-oxopyrimidin-1-yl)-3,6-dihydro-2H-pyran-2-carboxylic acid
SMILES (Canonical) CC(CCN(C)C(=N)N)C(C(=O)NC1C=CC(OC1C(=O)O)N2C=CC(=NC2=O)N)N
SMILES (Isomeric) CC(CCN(C)C(=N)N)C(C(=O)NC1C=CC(OC1C(=O)O)N2C=CC(=NC2=O)N)N
InChI InChI=1S/C18H28N8O5/c1-9(5-7-25(2)17(21)22)13(20)15(27)23-10-3-4-12(31-14(10)16(28)29)26-8-6-11(19)24-18(26)30/h3-4,6,8-10,12-14H,5,7,20H2,1-2H3,(H3,21,22)(H,23,27)(H,28,29)(H2,19,24,30)
InChI Key QHXNKYPHTJBRJV-UHFFFAOYSA-N
Popularity 10 references in papers

Physical and Chemical Properties

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Molecular Formula C18H28N8O5
Molecular Weight 436.50 g/mol
Exact Mass 436.21826602 g/mol
Topological Polar Surface Area (TPSA) 213.00 Ų
XlogP -4.40
Atomic LogP (AlogP) -1.97
H-Bond Acceptor 9
H-Bond Donor 6
Rotatable Bonds 8

Synonyms

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106133-33-9
3-[[2-amino-5-[carbamimidoyl(methyl)amino]-3-methylpentanoyl]amino]-6-(4-amino-2-oxopyrimidin-1-yl)-3,6-dihydro-2H-pyran-2-carboxylic acid
DTXSID30909931
beta-D-erythro-Hex-2-enopyranuronic acid, 4-((2-amino-5-((aminoiminomethyl)methylamino)-3-methyl-1-oxopentyl)amino)-1-(4-amino-2-oxo-1(2H)-pyrimidinyl)-1,2,3,4-tetradeoxy-
U 72026
U-72026
1-(4-{[2-Amino-1-hydroxy-3-methyl-5-(N-methylcarbamimidamido)pentylidene]amino}-2,3,4-trideoxyhex-2-enopyranuronosyl)-4-imino-1,4-dihydropyrimidin-2-ol

2D Structure

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2D Structure of Arginomycin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6288 62.88%
Caco-2 - 0.8388 83.88%
Blood Brain Barrier - 0.6750 67.50%
Human oral bioavailability - 0.5714 57.14%
Subcellular localzation Nucleus 0.4165 41.65%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9024 90.24%
OATP1B3 inhibitior + 0.9348 93.48%
MATE1 inhibitior - 0.8000 80.00%
OCT2 inhibitior - 0.9250 92.50%
BSEP inhibitior - 0.6376 63.76%
P-glycoprotein inhibitior - 0.4629 46.29%
P-glycoprotein substrate + 0.6977 69.77%
CYP3A4 substrate + 0.6342 63.42%
CYP2C9 substrate - 0.6014 60.14%
CYP2D6 substrate - 0.8603 86.03%
CYP3A4 inhibition - 0.9365 93.65%
CYP2C9 inhibition - 0.8393 83.93%
CYP2C19 inhibition - 0.8244 82.44%
CYP2D6 inhibition - 0.8706 87.06%
CYP1A2 inhibition - 0.8295 82.95%
CYP2C8 inhibition - 0.7741 77.41%
CYP inhibitory promiscuity - 0.9834 98.34%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.7800 78.00%
Carcinogenicity (trinary) Non-required 0.6331 63.31%
Eye corrosion - 0.9828 98.28%
Eye irritation - 0.9839 98.39%
Skin irritation - 0.7522 75.22%
Skin corrosion - 0.9252 92.52%
Ames mutagenesis - 0.6270 62.70%
Human Ether-a-go-go-Related Gene inhibition - 0.4914 49.14%
Micronuclear + 0.8400 84.00%
Hepatotoxicity + 0.7164 71.64%
skin sensitisation - 0.8323 83.23%
Respiratory toxicity + 0.8556 85.56%
Reproductive toxicity + 0.9111 91.11%
Mitochondrial toxicity + 0.9000 90.00%
Nephrotoxicity - 0.7131 71.31%
Acute Oral Toxicity (c) III 0.3846 38.46%
Estrogen receptor binding + 0.6954 69.54%
Androgen receptor binding + 0.7616 76.16%
Thyroid receptor binding + 0.5725 57.25%
Glucocorticoid receptor binding + 0.6452 64.52%
Aromatase binding + 0.5907 59.07%
PPAR gamma + 0.6781 67.81%
Honey bee toxicity - 0.8441 84.41%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.6900 69.00%
Fish aquatic toxicity + 0.7279 72.79%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.13% 96.09%
CHEMBL2581 P07339 Cathepsin D 95.91% 98.95%
CHEMBL4040 P28482 MAP kinase ERK2 93.72% 83.82%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 92.15% 90.71%
CHEMBL3060 Q9Y345 Glycine transporter 2 90.47% 99.17%
CHEMBL3401 O75469 Pregnane X receptor 89.88% 94.73%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 88.70% 94.45%
CHEMBL2553 Q15418 Ribosomal protein S6 kinase alpha 1 85.35% 85.11%
CHEMBL3891 P07384 Calpain 1 84.10% 93.04%
CHEMBL2514 O95665 Neurotensin receptor 2 83.51% 100.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 83.17% 95.56%
CHEMBL4224 P49759 Dual specificty protein kinase CLK1 82.97% 85.30%
CHEMBL1293249 Q13887 Kruppel-like factor 5 81.94% 86.33%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 81.22% 96.90%
CHEMBL5028 O14672 ADAM10 80.81% 97.50%
CHEMBL2107 P61073 C-X-C chemokine receptor type 4 80.41% 93.10%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 80.03% 96.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 129552
LOTUS LTS0250687
wikiData Q82879636