Apoptolidin B

Details

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Internal ID 18f48c24-bed0-4f0a-a5bc-7933c65c2d45
Taxonomy Phenylpropanoids and polyketides > Macrolides and analogues
IUPAC Name (3E,5E,7E,9R,10R,11E,13E,18R,20S)-20-[(R)-[(2R,3R,4S,5R,6R)-2,4-dihydroxy-6-[(2R)-2-[(2R,4S,5S,6S)-4-hydroxy-5-[(2S,4R,5R,6R)-5-hydroxy-4-methoxy-6-methyloxan-2-yl]oxy-4,6-dimethyloxan-2-yl]oxy-3-methoxypropyl]-3,5-dimethyloxan-2-yl]-hydroxymethyl]-10-[(2R,3S,4S,5R,6S)-3,4-dihydroxy-5-methoxy-6-methyloxan-2-yl]oxy-18-methoxy-3,5,7,9,13-pentamethyl-1-oxacycloicosa-3,5,7,11,13-pentaen-2-one
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C58H96O20/c1-30-18-16-17-19-40(68-13)25-45(75-55(64)34(5)24-32(3)22-31(2)23-33(4)42(21-20-30)76-56-51(62)50(61)52(70-15)38(9)73-56)53(63)58(66)36(7)48(59)35(6)43(78-58)26-41(29-67-12)74-47-28-57(11,65)54(39(10)72-47)77-46-27-44(69-14)49(60)37(8)71-46/h18,20-24,33,35-54,56,59-63,65-66H,16-17,19,25-29H2,1-15H3/b21-20+,30-18+,31-23+,32-22+,34-24+/t33-,35+,36-,37-,38+,39+,40-,41-,42-,43-,44-,45+,46+,47+,48+,49-,50+,51+,52+,53-,54+,56+,57+,58-/m1/s1
InChI Key CBFPSWROKQDVMQ-HETPTNIESA-N
Popularity 4 references in papers

Physical and Chemical Properties

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Molecular Formula C58H96O20
Molecular Weight 1113.40 g/mol
Exact Mass 1112.64949545 g/mol
Topological Polar Surface Area (TPSA) 269.00 Ų
XlogP 3.70
Atomic LogP (AlogP) 4.62
H-Bond Acceptor 20
H-Bond Donor 7
Rotatable Bonds 15

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Apoptolidin B

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6402 64.02%
Caco-2 - 0.8666 86.66%
Blood Brain Barrier - 0.6500 65.00%
Human oral bioavailability - 0.7857 78.57%
Subcellular localzation Mitochondria 0.8261 82.61%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8147 81.47%
OATP1B3 inhibitior + 0.8610 86.10%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.7750 77.50%
BSEP inhibitior + 0.9774 97.74%
P-glycoprotein inhibitior + 0.7467 74.67%
P-glycoprotein substrate + 0.8260 82.60%
CYP3A4 substrate + 0.7504 75.04%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8808 88.08%
CYP3A4 inhibition - 0.9612 96.12%
CYP2C9 inhibition - 0.8867 88.67%
CYP2C19 inhibition - 0.8792 87.92%
CYP2D6 inhibition - 0.9458 94.58%
CYP1A2 inhibition - 0.9244 92.44%
CYP2C8 inhibition + 0.7823 78.23%
CYP inhibitory promiscuity - 0.9785 97.85%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.6844 68.44%
Eye corrosion - 0.9898 98.98%
Eye irritation - 0.9003 90.03%
Skin irritation - 0.6403 64.03%
Skin corrosion - 0.9557 95.57%
Ames mutagenesis - 0.5500 55.00%
Human Ether-a-go-go-Related Gene inhibition + 0.8040 80.40%
Micronuclear - 0.8400 84.00%
Hepatotoxicity - 0.5250 52.50%
skin sensitisation - 0.8572 85.72%
Respiratory toxicity + 0.8000 80.00%
Reproductive toxicity + 0.7222 72.22%
Mitochondrial toxicity + 0.6000 60.00%
Nephrotoxicity - 0.6997 69.97%
Acute Oral Toxicity (c) III 0.4877 48.77%
Estrogen receptor binding + 0.8397 83.97%
Androgen receptor binding + 0.6965 69.65%
Thyroid receptor binding + 0.6937 69.37%
Glucocorticoid receptor binding + 0.8251 82.51%
Aromatase binding + 0.6308 63.08%
PPAR gamma + 0.8410 84.10%
Honey bee toxicity - 0.6093 60.93%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.5900 59.00%
Fish aquatic toxicity + 0.8794 87.94%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.95% 91.11%
CHEMBL253 P34972 Cannabinoid CB2 receptor 98.31% 97.25%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.08% 96.09%
CHEMBL3137262 O60341 LSD1/CoREST complex 97.69% 97.09%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 96.45% 85.14%
CHEMBL2581 P07339 Cathepsin D 96.13% 98.95%
CHEMBL3714130 P46095 G-protein coupled receptor 6 96.05% 97.36%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 94.24% 91.07%
CHEMBL1293249 Q13887 Kruppel-like factor 5 93.75% 86.33%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 93.69% 95.56%
CHEMBL241 Q14432 Phosphodiesterase 3A 92.19% 92.94%
CHEMBL3713062 P10646 Tissue factor pathway inhibitor 92.06% 97.33%
CHEMBL1902 P62942 FK506-binding protein 1A 91.58% 97.05%
CHEMBL1994 P08235 Mineralocorticoid receptor 90.00% 100.00%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 89.73% 97.14%
CHEMBL5608 Q16288 NT-3 growth factor receptor 89.58% 95.89%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 88.49% 96.47%
CHEMBL2288 Q13526 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 88.00% 91.71%
CHEMBL1806 P11388 DNA topoisomerase II alpha 87.51% 89.00%
CHEMBL3401 O75469 Pregnane X receptor 86.80% 94.73%
CHEMBL5255 O00206 Toll-like receptor 4 86.76% 92.50%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 86.71% 94.00%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 86.18% 99.23%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 86.13% 95.89%
CHEMBL1907600 Q00535 Cyclin-dependent kinase 5/CDK5 activator 1 85.80% 93.03%
CHEMBL3475 P05121 Plasminogen activator inhibitor-1 85.80% 83.00%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 84.51% 92.62%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 83.44% 100.00%
CHEMBL3004 P33527 Multidrug resistance-associated protein 1 82.58% 96.37%
CHEMBL2563 Q9UQL6 Histone deacetylase 5 80.88% 89.67%
CHEMBL4208 P20618 Proteasome component C5 80.51% 90.00%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 80.21% 91.24%
CHEMBL3359 P21462 Formyl peptide receptor 1 80.16% 93.56%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
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There are no matching plants.

Cross-Links

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PubChem 11788090
LOTUS LTS0080799
wikiData Q77570506