alpha-(Hydroxymethyl)serine

Details

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Internal ID 583d65e9-7ec0-498f-8f15-dea2bc416a4a
Taxonomy Organic acids and derivatives > Carboxylic acids and derivatives > Amino acids, peptides, and analogues > Alpha amino acids and derivatives > Alpha amino acids > L-alpha-amino acids
IUPAC Name 2-amino-3-hydroxy-2-(hydroxymethyl)propanoic acid
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C4H9NO4/c5-4(1-6,2-7)3(8)9/h6-7H,1-2,5H2,(H,8,9)
InChI Key ZRPDXDBGEYHEBJ-UHFFFAOYSA-N
Popularity 18 references in papers

Physical and Chemical Properties

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Molecular Formula C4H9NO4
Molecular Weight 135.12 g/mol
Exact Mass 135.05315777 g/mol
Topological Polar Surface Area (TPSA) 104.00 Ų
XlogP -4.90
Atomic LogP (AlogP) -2.25
H-Bond Acceptor 4
H-Bond Donor 4
Rotatable Bonds 3

Synonyms

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alpha-(hydroxymethyl)serine
2-amino-3-hydroxy-2-(hydroxymethyl)propanoic acid
(hydroxymethyl)serine
17149-11-0
hydroxymethylserine
CHEBI:28187
C03059
OH-CH3-serine
OH-CH3-SER
CHEMBL3099359
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of alpha-(Hydroxymethyl)serine

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8261 82.61%
Caco-2 - 0.7104 71.04%
Blood Brain Barrier - 0.5500 55.00%
Human oral bioavailability + 0.6000 60.00%
Subcellular localzation Lysosomes 0.7387 73.87%
OATP2B1 inhibitior - 0.8547 85.47%
OATP1B1 inhibitior + 0.9725 97.25%
OATP1B3 inhibitior + 0.9019 90.19%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.9500 95.00%
BSEP inhibitior - 0.9222 92.22%
P-glycoprotein inhibitior - 0.9884 98.84%
P-glycoprotein substrate - 0.9875 98.75%
CYP3A4 substrate - 0.7808 78.08%
CYP2C9 substrate - 0.8024 80.24%
CYP2D6 substrate - 0.7943 79.43%
CYP3A4 inhibition - 0.8821 88.21%
CYP2C9 inhibition - 0.9290 92.90%
CYP2C19 inhibition - 0.9090 90.90%
CYP2D6 inhibition - 0.9257 92.57%
CYP1A2 inhibition - 0.8271 82.71%
CYP2C8 inhibition - 0.9920 99.20%
CYP inhibitory promiscuity - 0.9882 98.82%
UGT catelyzed + 0.9000 90.00%
Carcinogenicity (binary) - 0.8100 81.00%
Carcinogenicity (trinary) Non-required 0.6458 64.58%
Eye corrosion - 0.9866 98.66%
Eye irritation + 0.8619 86.19%
Skin irritation - 0.6314 63.14%
Skin corrosion - 0.9403 94.03%
Ames mutagenesis - 0.8400 84.00%
Human Ether-a-go-go-Related Gene inhibition - 0.8620 86.20%
Micronuclear + 0.5300 53.00%
Hepatotoxicity + 0.6375 63.75%
skin sensitisation - 0.9548 95.48%
Respiratory toxicity - 0.6000 60.00%
Reproductive toxicity - 0.8111 81.11%
Mitochondrial toxicity + 0.5375 53.75%
Nephrotoxicity - 0.6974 69.74%
Acute Oral Toxicity (c) IV 0.5078 50.78%
Estrogen receptor binding - 0.9502 95.02%
Androgen receptor binding - 0.7752 77.52%
Thyroid receptor binding - 0.8296 82.96%
Glucocorticoid receptor binding - 0.9180 91.80%
Aromatase binding - 0.8778 87.78%
PPAR gamma - 0.7926 79.26%
Honey bee toxicity - 0.9770 97.70%
Biodegradation - 0.6500 65.00%
Crustacea aquatic toxicity - 0.8600 86.00%
Fish aquatic toxicity - 0.9505 95.05%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 91.42% 96.09%
CHEMBL4040 P28482 MAP kinase ERK2 86.41% 83.82%
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 83.77% 97.29%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Vicia pseudo-orobus

Cross-Links

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PubChem 439893
LOTUS LTS0201219
wikiData Q27103555