Alliumoside D

Details

Top
Internal ID 3eb0e3dd-49f7-49c8-8eb4-1b9982110996
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name (2S,3R,4R,5R,6S)-2-[(2R,3R,4S,5R,6R)-2-(hydroxymethyl)-6-[(4S,6R,7S,8R,9S,13R)-6-hydroxy-7,9,13-trimethyl-6-[3-methyl-4-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxybutyl]-5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-en-16-yl]-5-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-6-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-4-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-3-yl]oxy-6-methyloxane-3,4,5-triol
SMILES (Canonical) CC1C2C(CC3C2(CCC4C3CC=C5C4(CCC(C5)C6(C(C(C(C(O6)CO)OC7C(C(C(C(O7)C)O)O)O)OC8C(C(C(C(O8)C)O)O)O)OC9C(C(C(C(O9)CO)O)O)O)OC2C(C(C(C(O2)CO)O)O)O)C)C)OC1(CCC(C)COC1C(C(C(C(O1)CO)O)O)O)O
SMILES (Isomeric) C[C@H]1[C@H]2[C@H](CC3[C@@]2(CCC4C3CC=C5[C@@]4(CCC(C5)[C@]6([C@@H]([C@H]([C@@H]([C@H](O6)CO)O[C@H]7[C@@H]([C@@H]([C@H]([C@@H](O7)C)O)O)O)O[C@H]8[C@@H]([C@@H]([C@H]([C@@H](O8)C)O)O)O)O[C@@H]9[C@@H]([C@H]([C@@H]([C@H](O9)CO)O)O)O)O[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O)O)O)C)C)O[C@@]1(CCC(C)CO[C@H]1[C@@H]([C@H]([C@@H]([C@H](O1)CO)O)O)O)O
InChI InChI=1S/C63H104O32/c1-22(21-84-55-47(78)44(75)39(70)32(17-64)87-55)9-14-62(83)23(2)36-31(93-62)16-30-28-8-7-26-15-27(10-12-60(26,5)29(28)11-13-61(30,36)6)63(95-59-51(82)46(77)41(72)34(19-66)89-59)54(92-58-50(81)45(76)40(71)33(18-65)88-58)53(91-57-49(80)43(74)38(69)25(4)86-57)52(35(20-67)94-63)90-56-48(79)42(73)37(68)24(3)85-56/h7,22-25,27-59,64-83H,8-21H2,1-6H3/t22?,23-,24-,25-,27?,28?,29?,30?,31-,32+,33+,34+,35+,36-,37-,38-,39+,40+,41+,42+,43+,44-,45-,46-,47+,48+,49+,50+,51+,52+,53-,54+,55+,56-,57-,58+,59-,60-,61-,62+,63+/m0/s1
InChI Key NVMFOPGJOKRLTD-OMQHOTSQSA-N
Popularity 0 references in papers

Physical and Chemical Properties

Top
Molecular Formula C63H104O32
Molecular Weight 1373.50 g/mol
Exact Mass 1372.6510711 g/mol
Topological Polar Surface Area (TPSA) 515.00 Ų
XlogP -4.80
Atomic LogP (AlogP) -6.74
H-Bond Acceptor 32
H-Bond Donor 20
Rotatable Bonds 19

Synonyms

Top
56190-05-7
beta-D-Glucopyranoside, (3-beta,22-alpha)-26-(beta-D-glucopyranosyloxy)-22-hydroxyfurost-5-en-3-yl O-6-deoxy-alpha-L-mannopyranosyl-(1-4)-O-6-deoxy-alpha-L-mannopyranosyl-(1-6)-O-6-beta-D-glucopyranosyl-(1-2)-O-beta-D-glucopyranosyl-(1-3)-

2D Structure

Top
2D Structure of Alliumoside D

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8128 81.28%
Caco-2 - 0.8832 88.32%
Blood Brain Barrier - 0.7250 72.50%
Human oral bioavailability - 0.8571 85.71%
Subcellular localzation Mitochondria 0.7775 77.75%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8674 86.74%
OATP1B3 inhibitior + 0.9226 92.26%
MATE1 inhibitior - 0.9612 96.12%
OCT2 inhibitior - 0.7750 77.50%
BSEP inhibitior + 0.8920 89.20%
P-glycoprotein inhibitior + 0.7442 74.42%
P-glycoprotein substrate + 0.7060 70.60%
CYP3A4 substrate + 0.7501 75.01%
CYP2C9 substrate - 0.8020 80.20%
CYP2D6 substrate - 0.8336 83.36%
CYP3A4 inhibition - 0.9129 91.29%
CYP2C9 inhibition - 0.9142 91.42%
CYP2C19 inhibition - 0.9228 92.28%
CYP2D6 inhibition - 0.9336 93.36%
CYP1A2 inhibition - 0.9164 91.64%
CYP2C8 inhibition + 0.7536 75.36%
CYP inhibitory promiscuity - 0.9048 90.48%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.5234 52.34%
Eye corrosion - 0.9889 98.89%
Eye irritation - 0.9006 90.06%
Skin irritation - 0.5501 55.01%
Skin corrosion - 0.9418 94.18%
Ames mutagenesis - 0.8354 83.54%
Human Ether-a-go-go-Related Gene inhibition + 0.8306 83.06%
Micronuclear - 0.8500 85.00%
Hepatotoxicity - 0.7750 77.50%
skin sensitisation - 0.9238 92.38%
Respiratory toxicity + 0.7333 73.33%
Reproductive toxicity + 0.9111 91.11%
Mitochondrial toxicity + 0.5375 53.75%
Nephrotoxicity - 0.8599 85.99%
Acute Oral Toxicity (c) I 0.7663 76.63%
Estrogen receptor binding + 0.8242 82.42%
Androgen receptor binding + 0.7533 75.33%
Thyroid receptor binding + 0.5911 59.11%
Glucocorticoid receptor binding + 0.7547 75.47%
Aromatase binding + 0.6749 67.49%
PPAR gamma + 0.8193 81.93%
Honey bee toxicity - 0.5905 59.05%
Biodegradation - 0.7000 70.00%
Crustacea aquatic toxicity - 0.5900 59.00%
Fish aquatic toxicity + 0.9341 93.41%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.88% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.35% 91.11%
CHEMBL226 P30542 Adenosine A1 receptor 97.84% 95.93%
CHEMBL3359 P21462 Formyl peptide receptor 1 95.12% 93.56%
CHEMBL3137262 O60341 LSD1/CoREST complex 95.09% 97.09%
CHEMBL1994 P08235 Mineralocorticoid receptor 92.02% 100.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 89.39% 95.89%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 89.05% 95.89%
CHEMBL221 P23219 Cyclooxygenase-1 88.91% 90.17%
CHEMBL1293249 Q13887 Kruppel-like factor 5 88.57% 86.33%
CHEMBL1937 Q92769 Histone deacetylase 2 88.53% 94.75%
CHEMBL2842 P42345 Serine/threonine-protein kinase mTOR 88.29% 92.78%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 87.90% 89.05%
CHEMBL1806 P11388 DNA topoisomerase II alpha 87.83% 89.00%
CHEMBL3401 O75469 Pregnane X receptor 86.42% 94.73%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 85.93% 94.00%
CHEMBL4227 P25090 Lipoxin A4 receptor 85.76% 100.00%
CHEMBL218 P21554 Cannabinoid CB1 receptor 85.22% 96.61%
CHEMBL3392948 Q9NP59 Solute carrier family 40 member 1 83.83% 95.00%
CHEMBL2996 Q05655 Protein kinase C delta 83.79% 97.79%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 83.72% 91.24%
CHEMBL2581 P07339 Cathepsin D 83.52% 98.95%
CHEMBL2094135 Q96BI3 Gamma-secretase 83.34% 98.05%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 82.95% 94.45%
CHEMBL242 Q92731 Estrogen receptor beta 81.23% 98.35%
CHEMBL333 P08253 Matrix metalloproteinase-2 80.98% 96.31%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 80.91% 96.90%
CHEMBL4105838 Q96GG9 DCN1-like protein 1 80.62% 95.00%
CHEMBL5469 Q14289 Protein tyrosine kinase 2 beta 80.57% 91.03%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 80.44% 96.00%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 80.39% 93.00%
CHEMBL2335 P42785 Lysosomal Pro-X carboxypeptidase 80.35% 100.00%
CHEMBL4581 P52732 Kinesin-like protein 1 80.13% 93.18%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 80.07% 95.56%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Allium narcissiflorum

Cross-Links

Top
PubChem 3043811
LOTUS LTS0133761
wikiData Q105186304