Agrostemmasaponine 2

Details

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Internal ID fb847d4f-5f2c-42a5-8c66-d7a30c08152e
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Triterpene glycosides > Triterpene saponins
IUPAC Name 6-[[(3S,4S,4aR,6aR,6bS,8aS,12aS,14aR,14bR)-8a-[5-acetyl-4-hydroxy-3-[3-hydroxy-6-methyl-4-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-5-(3,4,5-trihydroxyoxan-2-yl)oxyoxan-2-yl]oxyoxan-2-yl]oxycarbonyl-4-formyl-4,6a,6b,11,11,14b-hexamethyl-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-3-hydroxy-5-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-4-(3,4,5-trihydroxyoxan-2-yl)oxyoxane-2-carboxylic acid
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C71H110O36/c1-26(75)28-22-94-63(55(38(28)78)105-62-50(90)53(103-60-47(87)43(83)41(81)33(20-72)98-60)51(27(2)97-62)101-58-45(85)39(79)31(76)23-95-58)107-65(93)71-17-15-66(3,4)19-30(71)29-9-10-36-67(5)13-12-37(68(6,25-74)35(67)11-14-70(36,8)69(29,7)16-18-71)100-64-56(106-61-48(88)44(84)42(82)34(21-73)99-61)52(49(89)54(104-64)57(91)92)102-59-46(86)40(80)32(77)24-96-59/h9,25,27-28,30-56,58-64,72-73,76-90H,10-24H2,1-8H3,(H,91,92)/t27?,28?,30-,31?,32?,33?,34?,35+,36+,37-,38?,39?,40?,41?,42?,43?,44?,45?,46?,47?,48?,49?,50?,51?,52?,53?,54?,55?,56?,58?,59?,60?,61?,62?,63?,64?,67-,68-,69+,70+,71-/m0/s1
InChI Key IEOHGLGGEBMWQW-NBTYGUIOSA-N
Popularity 3 references in papers

Physical and Chemical Properties

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Molecular Formula C71H110O36
Molecular Weight 1539.60 g/mol
Exact Mass 1538.6776798 g/mol
Topological Polar Surface Area (TPSA) 562.00 Ų
XlogP -3.40
Atomic LogP (AlogP) -5.50
H-Bond Acceptor 35
H-Bond Donor 18
Rotatable Bonds 19

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Agrostemmasaponine 2

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7601 76.01%
Caco-2 - 0.8609 86.09%
Blood Brain Barrier - 0.5250 52.50%
Human oral bioavailability - 0.8429 84.29%
Subcellular localzation Mitochondria 0.8703 87.03%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.7532 75.32%
OATP1B3 inhibitior - 0.4610 46.10%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.5026 50.26%
BSEP inhibitior + 0.9669 96.69%
P-glycoprotein inhibitior + 0.7434 74.34%
P-glycoprotein substrate + 0.5913 59.13%
CYP3A4 substrate + 0.7425 74.25%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8771 87.71%
CYP3A4 inhibition - 0.8310 83.10%
CYP2C9 inhibition - 0.8704 87.04%
CYP2C19 inhibition - 0.9216 92.16%
CYP2D6 inhibition - 0.9491 94.91%
CYP1A2 inhibition - 0.9009 90.09%
CYP2C8 inhibition + 0.8016 80.16%
CYP inhibitory promiscuity - 0.9733 97.33%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.6024 60.24%
Eye corrosion - 0.9896 98.96%
Eye irritation - 0.8966 89.66%
Skin irritation - 0.5876 58.76%
Skin corrosion - 0.9441 94.41%
Ames mutagenesis - 0.6400 64.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7717 77.17%
Micronuclear - 0.7800 78.00%
Hepatotoxicity - 0.8875 88.75%
skin sensitisation - 0.9013 90.13%
Respiratory toxicity - 0.5000 50.00%
Reproductive toxicity + 0.9111 91.11%
Mitochondrial toxicity - 0.6250 62.50%
Nephrotoxicity - 0.9417 94.17%
Acute Oral Toxicity (c) III 0.8023 80.23%
Estrogen receptor binding + 0.6464 64.64%
Androgen receptor binding + 0.7587 75.87%
Thyroid receptor binding + 0.6984 69.84%
Glucocorticoid receptor binding + 0.8157 81.57%
Aromatase binding + 0.7086 70.86%
PPAR gamma + 0.8305 83.05%
Honey bee toxicity - 0.6336 63.36%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.5600 56.00%
Fish aquatic toxicity + 0.9585 95.85%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.64% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.10% 96.09%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 93.06% 94.45%
CHEMBL1293249 Q13887 Kruppel-like factor 5 93.06% 86.33%
CHEMBL2581 P07339 Cathepsin D 92.98% 98.95%
CHEMBL3714130 P46095 G-protein coupled receptor 6 91.81% 97.36%
CHEMBL1806 P11388 DNA topoisomerase II alpha 91.14% 89.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 90.65% 95.56%
CHEMBL3137262 O60341 LSD1/CoREST complex 89.05% 97.09%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 88.44% 93.00%
CHEMBL1994 P08235 Mineralocorticoid receptor 86.36% 100.00%
CHEMBL4302 P08183 P-glycoprotein 1 85.97% 92.98%
CHEMBL226 P30542 Adenosine A1 receptor 84.03% 95.93%
CHEMBL335 P18031 Protein-tyrosine phosphatase 1B 83.56% 95.17%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 83.44% 95.50%
CHEMBL2716 Q8WUI4 Histone deacetylase 7 82.80% 89.44%
CHEMBL5028 O14672 ADAM10 82.67% 97.50%
CHEMBL3060 Q9Y345 Glycine transporter 2 82.35% 99.17%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 81.77% 86.92%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 80.10% 96.77%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Agrostemma githago

Cross-Links

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PubChem 139595380
LOTUS LTS0015253
wikiData Q105111892