Agelastatin D

Details

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Internal ID 9a11ac07-08fb-4dab-ab87-035a7dc610d6
Taxonomy Organic acids and derivatives > Carboxylic acids and derivatives > Carboxylic acid derivatives > Carboxylic acid amides > 2-heteroaryl carboxamides
IUPAC Name (1R,9S,10S,14S)-3-bromo-14-hydroxy-2,8,11,13-tetrazatetracyclo[7.6.0.02,6.010,14]pentadeca-3,5-diene-7,12-dione
SMILES (Canonical) C1C2C(C3C1(NC(=O)N3)O)NC(=O)C4=CC=C(N24)Br
SMILES (Isomeric) C1[C@@H]2[C@H]([C@H]3[C@@]1(NC(=O)N3)O)NC(=O)C4=CC=C(N24)Br
InChI InChI=1S/C11H11BrN4O3/c12-6-2-1-4-9(17)13-7-5(16(4)6)3-11(19)8(7)14-10(18)15-11/h1-2,5,7-8,19H,3H2,(H,13,17)(H2,14,15,18)/t5-,7-,8+,11+/m1/s1
InChI Key AMKORUFKJJIBRU-GIDNPQMSSA-N
Popularity 4 references in papers

Physical and Chemical Properties

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Molecular Formula C11H11BrN4O3
Molecular Weight 327.13 g/mol
Exact Mass 326.00145 g/mol
Topological Polar Surface Area (TPSA) 95.40 Ų
XlogP -0.50
Atomic LogP (AlogP) -0.32
H-Bond Acceptor 4
H-Bond Donor 4
Rotatable Bonds 0

Synonyms

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Agelastatine D
201338-45-6
DTXSID30173953
(1R,9S,10S,14S)-3-bromo-14-hydroxy-2,8,11,13-tetrazatetracyclo[7.6.0.02,6.010,14]pentadeca-3,5-diene-7,12-dione
Imidazo(4',5':4,5)cyclopenta(1,2-e)pyrrolo(1,2-a)pyrazine-4,7-dione, 1-bromo-5,5a,5b,6,8,8a,9,9a-octahydro-8a-hydroxy-, (5aS-(5aalpha,5bbeta,8abeta,9aalpha))-
(1R,9S,10S,14S)-3-bromo-14-hydroxy-2,8,11,13-tetrazatetracyclo(7.6.0.02,6.010,14)pentadeca-3,5-diene-7,12-dione
RefChem:110129
DTXCID9096444
(5aS,5bS,8aS,9aR)-1-Bromo-8a-hydroxy-5,5a,5b,6,8,8a,9,9a-octahydroimidazo[4',5':4,5]cyclopenta[1,2-e]pyrrolo[1,2-a]pyrazine-4,7-dione
CHEMBL517037
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Agelastatin D

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9617 96.17%
Caco-2 - 0.8022 80.22%
Blood Brain Barrier + 0.7000 70.00%
Human oral bioavailability + 0.5286 52.86%
Subcellular localzation Mitochondria 0.5175 51.75%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9454 94.54%
OATP1B3 inhibitior + 0.9450 94.50%
MATE1 inhibitior - 0.8000 80.00%
OCT2 inhibitior - 0.9567 95.67%
BSEP inhibitior - 0.9395 93.95%
P-glycoprotein inhibitior - 0.9483 94.83%
P-glycoprotein substrate - 0.7769 77.69%
CYP3A4 substrate - 0.5095 50.95%
CYP2C9 substrate - 0.8000 80.00%
CYP2D6 substrate - 0.8605 86.05%
CYP3A4 inhibition - 0.9745 97.45%
CYP2C9 inhibition - 0.8596 85.96%
CYP2C19 inhibition - 0.8017 80.17%
CYP2D6 inhibition - 0.8584 85.84%
CYP1A2 inhibition - 0.7317 73.17%
CYP2C8 inhibition - 0.9429 94.29%
CYP inhibitory promiscuity - 0.9353 93.53%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.7522 75.22%
Carcinogenicity (trinary) Non-required 0.6087 60.87%
Eye corrosion - 0.9847 98.47%
Eye irritation - 0.9731 97.31%
Skin irritation - 0.7984 79.84%
Skin corrosion - 0.9369 93.69%
Ames mutagenesis - 0.5700 57.00%
Human Ether-a-go-go-Related Gene inhibition - 0.5721 57.21%
Micronuclear + 0.9600 96.00%
Hepatotoxicity + 0.6836 68.36%
skin sensitisation - 0.8680 86.80%
Respiratory toxicity + 0.7111 71.11%
Reproductive toxicity + 0.9444 94.44%
Mitochondrial toxicity + 0.8875 88.75%
Nephrotoxicity - 0.6289 62.89%
Acute Oral Toxicity (c) III 0.6279 62.79%
Estrogen receptor binding - 0.5833 58.33%
Androgen receptor binding - 0.5427 54.27%
Thyroid receptor binding + 0.5184 51.84%
Glucocorticoid receptor binding - 0.7142 71.42%
Aromatase binding - 0.7161 71.61%
PPAR gamma + 0.5371 53.71%
Honey bee toxicity - 0.8891 88.91%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity + 0.5500 55.00%
Fish aquatic toxicity - 0.8395 83.95%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL1937 Q92769 Histone deacetylase 2 96.11% 94.75%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.95% 91.11%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 95.64% 94.45%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.16% 96.09%
CHEMBL253 P34972 Cannabinoid CB2 receptor 93.65% 97.25%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 93.31% 95.56%
CHEMBL2581 P07339 Cathepsin D 93.10% 98.95%
CHEMBL5697 Q9GZT9 Egl nine homolog 1 90.08% 93.40%
CHEMBL3137262 O60341 LSD1/CoREST complex 89.45% 97.09%
CHEMBL1907605 P24864 Cyclin-dependent kinase 2/cyclin E1 85.61% 92.88%
CHEMBL4208 P20618 Proteasome component C5 84.13% 90.00%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 82.42% 99.23%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 81.65% 93.04%
CHEMBL3310 Q96DB2 Histone deacetylase 11 81.64% 88.56%
CHEMBL5103 Q969S8 Histone deacetylase 10 81.48% 90.08%
CHEMBL2095226 P05556 Integrin alpha-5/beta-1 81.38% 96.39%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 81.31% 94.00%
CHEMBL3192 Q9BY41 Histone deacetylase 8 80.76% 93.99%
CHEMBL1806 P11388 DNA topoisomerase II alpha 80.61% 89.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

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PubChem 177418
LOTUS LTS0192279
wikiData Q83043998