4-Tridecanone, 13-((2R,3R,4R,5R)-3,4-dihydroxy-5-(hydroxymethyl)-2-pyrrolidinyl)-1,13-dihydroxy-, (13R)-

Details

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Internal ID 4008c21a-554b-4210-9d79-a483a51b8c94
Taxonomy Organoheterocyclic compounds > Pyrrolidines
IUPAC Name (13R)-13-[(2R,3R,4R,5R)-3,4-dihydroxy-5-(hydroxymethyl)pyrrolidin-2-yl]-1,13-dihydroxytridecan-4-one
SMILES (Canonical) C(CCCCC(=O)CCCO)CCCC(C1C(C(C(N1)CO)O)O)O
SMILES (Isomeric) C(CCCCC(=O)CCCO)CCC[C@H]([C@@H]1[C@H]([C@@H]([C@H](N1)CO)O)O)O
InChI InChI=1S/C18H35NO6/c20-11-7-9-13(22)8-5-3-1-2-4-6-10-15(23)16-18(25)17(24)14(12-21)19-16/h14-21,23-25H,1-12H2/t14-,15-,16-,17-,18-/m1/s1
InChI Key SXHZDGBIKMHEFL-DUQPFJRNSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C18H35NO6
Molecular Weight 361.50 g/mol
Exact Mass 361.24643784 g/mol
Topological Polar Surface Area (TPSA) 130.00 Ų
XlogP 0.80
Atomic LogP (AlogP) -0.14
H-Bond Acceptor 7
H-Bond Donor 6
Rotatable Bonds 14

Synonyms

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190317-56-7
4-Tridecanone, 13-((2R,3R,4R,5R)-3,4-dihydroxy-5-(hydroxymethyl)-2-pyrrolidinyl)-1,13-dihydroxy-, (13R)-
CHEMBL470659
DTXSID70940580
13-[3,4-Dihydroxy-5-(hydroxymethyl)pyrrolidin-2-yl]-1,13-dihydroxytridecan-4-one

2D Structure

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2D Structure of 4-Tridecanone, 13-((2R,3R,4R,5R)-3,4-dihydroxy-5-(hydroxymethyl)-2-pyrrolidinyl)-1,13-dihydroxy-, (13R)-

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7956 79.56%
Caco-2 - 0.8671 86.71%
Blood Brain Barrier - 0.6000 60.00%
Human oral bioavailability - 0.6429 64.29%
Subcellular localzation Mitochondria 0.6549 65.49%
OATP2B1 inhibitior - 0.8520 85.20%
OATP1B1 inhibitior + 0.9497 94.97%
OATP1B3 inhibitior + 0.9376 93.76%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.8000 80.00%
BSEP inhibitior - 0.8948 89.48%
P-glycoprotein inhibitior - 0.8355 83.55%
P-glycoprotein substrate - 0.6523 65.23%
CYP3A4 substrate - 0.5000 50.00%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate + 0.3834 38.34%
CYP3A4 inhibition - 0.9838 98.38%
CYP2C9 inhibition - 0.9457 94.57%
CYP2C19 inhibition - 0.9539 95.39%
CYP2D6 inhibition - 0.9283 92.83%
CYP1A2 inhibition - 0.8385 83.85%
CYP2C8 inhibition - 0.8736 87.36%
CYP inhibitory promiscuity - 0.9848 98.48%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9500 95.00%
Carcinogenicity (trinary) Non-required 0.7278 72.78%
Eye corrosion - 0.9723 97.23%
Eye irritation - 0.8865 88.65%
Skin irritation - 0.7664 76.64%
Skin corrosion - 0.8832 88.32%
Ames mutagenesis - 0.7600 76.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6516 65.16%
Micronuclear - 0.5000 50.00%
Hepatotoxicity - 0.7607 76.07%
skin sensitisation - 0.9000 90.00%
Respiratory toxicity - 0.6889 68.89%
Reproductive toxicity + 0.5333 53.33%
Mitochondrial toxicity + 0.6750 67.50%
Nephrotoxicity - 0.5868 58.68%
Acute Oral Toxicity (c) III 0.5785 57.85%
Estrogen receptor binding - 0.7757 77.57%
Androgen receptor binding - 0.6918 69.18%
Thyroid receptor binding - 0.5916 59.16%
Glucocorticoid receptor binding - 0.6835 68.35%
Aromatase binding - 0.6078 60.78%
PPAR gamma - 0.5376 53.76%
Honey bee toxicity - 0.8681 86.81%
Biodegradation - 0.5000 50.00%
Crustacea aquatic toxicity - 0.7745 77.45%
Fish aquatic toxicity - 0.9723 97.23%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.01% 96.09%
CHEMBL3060 Q9Y345 Glycine transporter 2 92.03% 99.17%
CHEMBL2581 P07339 Cathepsin D 90.70% 98.95%
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 88.66% 97.29%
CHEMBL3137262 O60341 LSD1/CoREST complex 86.76% 97.09%
CHEMBL3145 P42338 PI3-kinase p110-beta subunit 86.76% 98.75%
CHEMBL1907589 P17787 Neuronal acetylcholine receptor; alpha4/beta2 85.57% 94.55%
CHEMBL3392948 Q9NP59 Solute carrier family 40 member 1 84.32% 95.00%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 84.19% 95.89%
CHEMBL4040 P28482 MAP kinase ERK2 84.13% 83.82%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 83.75% 94.45%
CHEMBL1829 O15379 Histone deacetylase 3 82.43% 95.00%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 82.30% 96.47%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 82.00% 91.11%
CHEMBL3437 Q16853 Amine oxidase, copper containing 81.94% 94.00%
CHEMBL256 P0DMS8 Adenosine A3 receptor 81.45% 95.93%
CHEMBL5103 Q969S8 Histone deacetylase 10 80.78% 90.08%
CHEMBL1865 Q9UBN7 Histone deacetylase 6 80.31% 97.03%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Broussonetia kazinoki

Cross-Links

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PubChem 10808575
LOTUS LTS0274076
wikiData Q82917268