(2S,3R,4S,5S,6R)-2-[(2S,3R,4S,5R,6R)-2-[(2S,3R,4S,5R,6R)-2-[(2R,3R,4R,5R,6R)-4,5-dihydroxy-2-(hydroxymethyl)-6-[(1R,2S,4S,6R,7S,8R,9S,12S,13S,15R,16R,18S)-15-hydroxy-7,9,13-trimethyl-5'-methylidenespiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-16-yl]oxyoxan-3-yl]oxy-5-hydroxy-6-(hydroxymethyl)-4-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-3-yl]oxy-3,5-dihydroxy-6-(hydroxymethyl)oxan-4-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol

Details

Top
Internal ID 9be5ab02-461f-451b-8926-36da7bc95f6f
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name (2S,3R,4S,5S,6R)-2-[(2S,3R,4S,5R,6R)-2-[(2S,3R,4S,5R,6R)-2-[(2R,3R,4R,5R,6R)-4,5-dihydroxy-2-(hydroxymethyl)-6-[(1R,2S,4S,6R,7S,8R,9S,12S,13S,15R,16R,18S)-15-hydroxy-7,9,13-trimethyl-5'-methylidenespiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-16-yl]oxyoxan-3-yl]oxy-5-hydroxy-6-(hydroxymethyl)-4-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-3-yl]oxy-3,5-dihydroxy-6-(hydroxymethyl)oxan-4-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C56H90O28/c1-20-7-10-56(74-18-20)21(2)34-29(84-56)12-25-23-6-5-22-11-28(26(61)13-55(22,4)24(23)8-9-54(25,34)3)75-50-43(71)40(68)45(33(17-60)79-50)80-53-48(47(38(66)32(16-59)78-53)82-49-41(69)35(63)27(62)19-73-49)83-52-44(72)46(37(65)31(15-58)77-52)81-51-42(70)39(67)36(64)30(14-57)76-51/h21-53,57-72H,1,5-19H2,2-4H3/t21-,22-,23+,24-,25-,26+,27+,28+,29-,30+,31+,32+,33+,34-,35-,36+,37+,38+,39-,40+,41+,42+,43+,44+,45-,46-,47-,48+,49-,50+,51-,52-,53-,54-,55-,56+/m0/s1
InChI Key HNIVPDXSMCQXPQ-FFNPAMDPSA-N
Popularity 2 references in papers

Physical and Chemical Properties

Top
Molecular Formula C56H90O28
Molecular Weight 1211.30 g/mol
Exact Mass 1210.56186221 g/mol
Topological Polar Surface Area (TPSA) 434.00 Ų
XlogP -3.60
Atomic LogP (AlogP) -5.56
H-Bond Acceptor 28
H-Bond Donor 16
Rotatable Bonds 14

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of (2S,3R,4S,5S,6R)-2-[(2S,3R,4S,5R,6R)-2-[(2S,3R,4S,5R,6R)-2-[(2R,3R,4R,5R,6R)-4,5-dihydroxy-2-(hydroxymethyl)-6-[(1R,2S,4S,6R,7S,8R,9S,12S,13S,15R,16R,18S)-15-hydroxy-7,9,13-trimethyl-5'-methylidenespiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-16-yl]oxyoxan-3-yl]oxy-5-hydroxy-6-(hydroxymethyl)-4-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-3-yl]oxy-3,5-dihydroxy-6-(hydroxymethyl)oxan-4-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6654 66.54%
Caco-2 - 0.8734 87.34%
Blood Brain Barrier - 0.6500 65.00%
Human oral bioavailability - 0.7857 78.57%
Subcellular localzation Mitochondria 0.6422 64.22%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8706 87.06%
OATP1B3 inhibitior + 0.9222 92.22%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.6000 60.00%
BSEP inhibitior + 0.9071 90.71%
P-glycoprotein inhibitior + 0.7404 74.04%
P-glycoprotein substrate + 0.5124 51.24%
CYP3A4 substrate + 0.7531 75.31%
CYP2C9 substrate - 0.8054 80.54%
CYP2D6 substrate - 0.8216 82.16%
CYP3A4 inhibition - 0.9082 90.82%
CYP2C9 inhibition - 0.9013 90.13%
CYP2C19 inhibition - 0.8950 89.50%
CYP2D6 inhibition - 0.9360 93.60%
CYP1A2 inhibition - 0.8969 89.69%
CYP2C8 inhibition + 0.7339 73.39%
CYP inhibitory promiscuity - 0.9312 93.12%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.6013 60.13%
Eye corrosion - 0.9894 98.94%
Eye irritation - 0.9025 90.25%
Skin irritation + 0.5000 50.00%
Skin corrosion - 0.9412 94.12%
Ames mutagenesis - 0.7678 76.78%
Human Ether-a-go-go-Related Gene inhibition + 0.8612 86.12%
Micronuclear - 0.9000 90.00%
Hepatotoxicity - 0.8125 81.25%
skin sensitisation - 0.9084 90.84%
Respiratory toxicity + 0.7889 78.89%
Reproductive toxicity + 0.8444 84.44%
Mitochondrial toxicity + 0.5500 55.00%
Nephrotoxicity - 0.9635 96.35%
Acute Oral Toxicity (c) I 0.7360 73.60%
Estrogen receptor binding + 0.8525 85.25%
Androgen receptor binding + 0.7228 72.28%
Thyroid receptor binding - 0.5147 51.47%
Glucocorticoid receptor binding + 0.6193 61.93%
Aromatase binding + 0.6633 66.33%
PPAR gamma + 0.7826 78.26%
Honey bee toxicity - 0.5856 58.56%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity - 0.5500 55.00%
Fish aquatic toxicity + 0.9517 95.17%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.74% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.51% 96.09%
CHEMBL1994 P08235 Mineralocorticoid receptor 94.80% 100.00%
CHEMBL226 P30542 Adenosine A1 receptor 93.94% 95.93%
CHEMBL3137262 O60341 LSD1/CoREST complex 92.67% 97.09%
CHEMBL237 P41145 Kappa opioid receptor 92.20% 98.10%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 91.27% 95.50%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 91.11% 94.45%
CHEMBL218 P21554 Cannabinoid CB1 receptor 90.43% 96.61%
CHEMBL259 P32245 Melanocortin receptor 4 86.50% 95.38%
CHEMBL233 P35372 Mu opioid receptor 86.16% 97.93%
CHEMBL4618 P09960 Leukotriene A4 hydrolase 85.93% 97.86%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 85.21% 96.77%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 85.17% 96.21%
CHEMBL1293249 Q13887 Kruppel-like factor 5 85.13% 86.33%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 84.68% 92.86%
CHEMBL5608 Q16288 NT-3 growth factor receptor 84.32% 95.89%
CHEMBL4581 P52732 Kinesin-like protein 1 84.21% 93.18%
CHEMBL241 Q14432 Phosphodiesterase 3A 83.65% 92.94%
CHEMBL6136 O60341 Lysine-specific histone demethylase 1 82.23% 95.58%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 82.16% 95.89%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 80.95% 100.00%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 80.83% 91.24%
CHEMBL2996 Q05655 Protein kinase C delta 80.50% 97.79%
CHEMBL5255 O00206 Toll-like receptor 4 80.24% 92.50%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Triteleia hyacinthina

Cross-Links

Top
PubChem 162998520
LOTUS LTS0268147
wikiData Q105030888