ADP-D-ribose

Details

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Internal ID a371db65-12f7-4e96-a8f7-1af6f0e77552
Taxonomy Nucleosides, nucleotides, and analogues > Purine nucleotides > Purine nucleotide sugars
IUPAC Name [[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl] [(2R,3S,4R)-3,4,5-trihydroxyoxolan-2-yl]methyl hydrogen phosphate
SMILES (Canonical) C1=NC(=C2C(=N1)N(C=N2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OCC4C(C(C(O4)O)O)O)O)O)N
SMILES (Isomeric) C1=NC(=C2C(=N1)N(C=N2)[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)OP(=O)(O)OC[C@@H]4[C@H]([C@H](C(O4)O)O)O)O)O)N
InChI InChI=1S/C15H23N5O14P2/c16-12-7-13(18-3-17-12)20(4-19-7)14-10(23)8(21)5(32-14)1-30-35(26,27)34-36(28,29)31-2-6-9(22)11(24)15(25)33-6/h3-6,8-11,14-15,21-25H,1-2H2,(H,26,27)(H,28,29)(H2,16,17,18)/t5-,6-,8-,9-,10-,11-,14-,15?/m1/s1
InChI Key SRNWOUGRCWSEMX-TYASJMOZSA-N
Popularity 3,354 references in papers

Physical and Chemical Properties

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Molecular Formula C15H23N5O14P2
Molecular Weight 559.32 g/mol
Exact Mass 559.07167442 g/mol
Topological Polar Surface Area (TPSA) 292.00 Ų
XlogP -6.10
Atomic LogP (AlogP) -3.28
H-Bond Acceptor 17
H-Bond Donor 8
Rotatable Bonds 9

Synonyms

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adpribose
CHEBI:16960
Adenosine 5'-diphosphoribose
AdoPPRib
Adenosine 5'-(trihydrogen diphosphate), P'-5-ester with D-ribose
ADP-Rib
D-ribofuranose, 5-5'-ester with adenosine 5'-(trihydrogen pyrophosphate)
(Rib5)ppA
A5'pp5Rib
adenosine diphosphate ribose
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of ADP-D-ribose

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.7900 79.00%
Caco-2 - 0.8938 89.38%
Blood Brain Barrier - 0.6250 62.50%
Human oral bioavailability - 0.6714 67.14%
Subcellular localzation Mitochondria 0.3053 30.53%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9394 93.94%
OATP1B3 inhibitior + 0.9454 94.54%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.9750 97.50%
BSEP inhibitior - 0.7524 75.24%
P-glycoprotein inhibitior - 0.4786 47.86%
P-glycoprotein substrate - 0.7641 76.41%
CYP3A4 substrate + 0.5438 54.38%
CYP2C9 substrate - 0.8071 80.71%
CYP2D6 substrate - 0.8651 86.51%
CYP3A4 inhibition - 0.8623 86.23%
CYP2C9 inhibition - 0.9263 92.63%
CYP2C19 inhibition - 0.9138 91.38%
CYP2D6 inhibition - 0.8856 88.56%
CYP1A2 inhibition - 0.8948 89.48%
CYP2C8 inhibition - 0.6811 68.11%
CYP inhibitory promiscuity - 0.9442 94.42%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9400 94.00%
Carcinogenicity (trinary) Non-required 0.5459 54.59%
Eye corrosion - 0.9871 98.71%
Eye irritation - 0.9400 94.00%
Skin irritation - 0.7620 76.20%
Skin corrosion - 0.9257 92.57%
Ames mutagenesis - 0.8300 83.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6609 66.09%
Micronuclear + 1.0000 100.00%
Hepatotoxicity - 0.6250 62.50%
skin sensitisation - 0.8445 84.45%
Respiratory toxicity + 0.9444 94.44%
Reproductive toxicity + 0.9667 96.67%
Mitochondrial toxicity + 1.0000 100.00%
Nephrotoxicity - 0.7567 75.67%
Acute Oral Toxicity (c) III 0.4822 48.22%
Estrogen receptor binding + 0.7000 70.00%
Androgen receptor binding + 0.7898 78.98%
Thyroid receptor binding + 0.5438 54.38%
Glucocorticoid receptor binding - 0.5000 50.00%
Aromatase binding + 0.6968 69.68%
PPAR gamma + 0.6816 68.16%
Honey bee toxicity - 0.7104 71.04%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity - 0.5800 58.00%
Fish aquatic toxicity - 0.4946 49.46%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL1075162 Q13304 Uracil nucleotide/cysteinyl leukotriene receptor 98.45% 80.33%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.37% 96.09%
CHEMBL4040 P28482 MAP kinase ERK2 95.88% 83.82%
CHEMBL3137261 O14744 PRMT5/MEP50 complex 94.22% 100.00%
CHEMBL2243 O00519 Anandamide amidohydrolase 92.66% 97.53%
CHEMBL3401 O75469 Pregnane X receptor 91.74% 94.73%
CHEMBL226 P30542 Adenosine A1 receptor 89.28% 95.93%
CHEMBL4523377 Q86WV6 Stimulator of interferon genes protein 85.65% 95.48%
CHEMBL5608 Q16288 NT-3 growth factor receptor 85.42% 95.89%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 84.68% 91.11%
CHEMBL1806 P11388 DNA topoisomerase II alpha 84.10% 89.00%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 83.83% 94.00%
CHEMBL5957 P21589 5'-nucleotidase 83.44% 97.78%
CHEMBL5524 Q99873 Protein-arginine N-methyltransferase 1 83.03% 96.67%
CHEMBL1293249 Q13887 Kruppel-like factor 5 82.47% 86.33%
CHEMBL3891 P07384 Calpain 1 82.28% 93.04%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 81.62% 99.23%
CHEMBL3060 Q9Y345 Glycine transporter 2 81.22% 99.17%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
There are no matching plants.

Cross-Links

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PubChem 33576
LOTUS LTS0200344
wikiData Q61416