(1S,4R)-3,5,5-trimethyl-4-[(1E,3E,5E,7E,9E,11E,13E,15E,17E)-3,7,12,16-tetramethyl-18-(2,6,6-trimethylcyclohexen-1-yl)octadeca-1,3,5,7,9,11,13,15,17-nonaenyl]cyclohex-2-en-1-ol

Details

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Internal ID e465ba3f-25d3-4006-b2bf-b37589c2abe5
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Tetraterpenoids > Carotenoids > Xanthophylls
IUPAC Name (1S,4R)-3,5,5-trimethyl-4-[(1E,3E,5E,7E,9E,11E,13E,15E,17E)-3,7,12,16-tetramethyl-18-(2,6,6-trimethylcyclohexen-1-yl)octadeca-1,3,5,7,9,11,13,15,17-nonaenyl]cyclohex-2-en-1-ol
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C40H56O/c1-30(18-13-20-32(3)23-25-37-34(5)22-15-27-39(37,7)8)16-11-12-17-31(2)19-14-21-33(4)24-26-38-35(6)28-36(41)29-40(38,9)10/h11-14,16-21,23-26,28,36,38,41H,15,22,27,29H2,1-10H3/b12-11+,18-13+,19-14+,25-23+,26-24+,30-16+,31-17+,32-20+,33-21+/t36-,38+/m1/s1
InChI Key ORAKUVXRZWMARG-ZNESFSIESA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C40H56O
Molecular Weight 552.90 g/mol
Exact Mass 552.433116406 g/mol
Topological Polar Surface Area (TPSA) 20.20 Ų
XlogP 12.30
Atomic LogP (AlogP) 11.43
H-Bond Acceptor 1
H-Bond Donor 1
Rotatable Bonds 10

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (1S,4R)-3,5,5-trimethyl-4-[(1E,3E,5E,7E,9E,11E,13E,15E,17E)-3,7,12,16-tetramethyl-18-(2,6,6-trimethylcyclohexen-1-yl)octadeca-1,3,5,7,9,11,13,15,17-nonaenyl]cyclohex-2-en-1-ol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9962 99.62%
Caco-2 - 0.7754 77.54%
Blood Brain Barrier + 0.6250 62.50%
Human oral bioavailability - 0.6714 67.14%
Subcellular localzation Lysosomes 0.4716 47.16%
OATP2B1 inhibitior - 0.8565 85.65%
OATP1B1 inhibitior - 0.5139 51.39%
OATP1B3 inhibitior + 0.8919 89.19%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.7250 72.50%
BSEP inhibitior + 0.9962 99.62%
P-glycoprotein inhibitior + 0.8186 81.86%
P-glycoprotein substrate - 0.6987 69.87%
CYP3A4 substrate + 0.6721 67.21%
CYP2C9 substrate - 0.8191 81.91%
CYP2D6 substrate - 0.7760 77.60%
CYP3A4 inhibition - 0.9080 90.80%
CYP2C9 inhibition - 0.8691 86.91%
CYP2C19 inhibition - 0.8009 80.09%
CYP2D6 inhibition - 0.9378 93.78%
CYP1A2 inhibition - 0.9102 91.02%
CYP2C8 inhibition + 0.5053 50.53%
CYP inhibitory promiscuity - 0.8202 82.02%
UGT catelyzed + 0.9000 90.00%
Carcinogenicity (binary) - 0.8428 84.28%
Carcinogenicity (trinary) Non-required 0.6253 62.53%
Eye corrosion - 0.9726 97.26%
Eye irritation - 0.9292 92.92%
Skin irritation + 0.7123 71.23%
Skin corrosion - 0.9493 94.93%
Ames mutagenesis - 0.5666 56.66%
Human Ether-a-go-go-Related Gene inhibition + 0.8865 88.65%
Micronuclear - 0.9600 96.00%
Hepatotoxicity - 0.5500 55.00%
skin sensitisation + 0.8376 83.76%
Respiratory toxicity + 0.6222 62.22%
Reproductive toxicity + 0.6111 61.11%
Mitochondrial toxicity - 0.6375 63.75%
Nephrotoxicity + 0.6501 65.01%
Acute Oral Toxicity (c) III 0.8214 82.14%
Estrogen receptor binding + 0.8480 84.80%
Androgen receptor binding + 0.7099 70.99%
Thyroid receptor binding + 0.7337 73.37%
Glucocorticoid receptor binding + 0.8303 83.03%
Aromatase binding - 0.6053 60.53%
PPAR gamma + 0.7403 74.03%
Honey bee toxicity - 0.7845 78.45%
Biodegradation - 0.9500 95.00%
Crustacea aquatic toxicity + 0.5900 59.00%
Fish aquatic toxicity + 0.9441 94.41%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.74% 91.11%
CHEMBL2061 P19793 Retinoid X receptor alpha 94.30% 91.67%
CHEMBL1870 P28702 Retinoid X receptor beta 92.81% 95.00%
CHEMBL1937 Q92769 Histone deacetylase 2 91.87% 94.75%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 91.76% 96.09%
CHEMBL2004 P48443 Retinoid X receptor gamma 91.12% 100.00%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 91.08% 95.50%
CHEMBL1293249 Q13887 Kruppel-like factor 5 89.10% 86.33%
CHEMBL1994 P08235 Mineralocorticoid receptor 88.68% 100.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 88.32% 95.56%
CHEMBL2288 Q13526 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 85.96% 91.71%
CHEMBL4040 P28482 MAP kinase ERK2 84.69% 83.82%
CHEMBL5608 Q16288 NT-3 growth factor receptor 84.57% 95.89%
CHEMBL1806 P11388 DNA topoisomerase II alpha 80.61% 89.00%
CHEMBL1977 P11473 Vitamin D receptor 80.02% 99.43%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Physalis minima

Cross-Links

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PubChem 162864512
LOTUS LTS0163226
wikiData Q105197359