(2S)-4-[(E)-2-[(2S)-2-carboxy-5-[(2S,3R,4R,5S,6R)-5-(2-carboxyacetyl)oxy-3,4-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-6-hydroxy-2,3-dihydroindol-1-yl]ethenyl]-2,3-dihydropyridine-2,6-dicarboxylic acid

Details

Top
Internal ID eee8a44a-1104-4a23-b601-ddce5870f20f
Taxonomy Organic acids and derivatives > Carboxylic acids and derivatives > Pentacarboxylic acids and derivatives
IUPAC Name (2S)-4-[(E)-2-[(2S)-2-carboxy-5-[(2S,3R,4R,5S,6R)-5-(2-carboxyacetyl)oxy-3,4-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-6-hydroxy-2,3-dihydroindol-1-yl]ethenyl]-2,3-dihydropyridine-2,6-dicarboxylic acid
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C27H28N2O16/c30-9-18-23(45-20(34)8-19(32)33)21(35)22(36)27(44-18)43-17-6-11-5-15(26(41)42)29(14(11)7-16(17)31)2-1-10-3-12(24(37)38)28-13(4-10)25(39)40/h1-3,6-7,13,15,18,21-23,27,30-31,35-36H,4-5,8-9H2,(H,32,33)(H,37,38)(H,39,40)(H,41,42)/b2-1+/t13-,15-,18+,21+,22+,23+,27+/m0/s1
InChI Key IKFMLZRWSCLOMP-JUFXGHKBSA-N
Popularity 2 references in papers

Physical and Chemical Properties

Top
Molecular Formula C27H28N2O16
Molecular Weight 636.50 g/mol
Exact Mass 636.14388281 g/mol
Topological Polar Surface Area (TPSA) 290.00 Ų
XlogP -1.50
Atomic LogP (AlogP) -1.77
H-Bond Acceptor 14
H-Bond Donor 8
Rotatable Bonds 11

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of (2S)-4-[(E)-2-[(2S)-2-carboxy-5-[(2S,3R,4R,5S,6R)-5-(2-carboxyacetyl)oxy-3,4-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-6-hydroxy-2,3-dihydroindol-1-yl]ethenyl]-2,3-dihydropyridine-2,6-dicarboxylic acid

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8073 80.73%
Caco-2 - 0.8910 89.10%
Blood Brain Barrier - 0.5500 55.00%
Human oral bioavailability - 0.6143 61.43%
Subcellular localzation Mitochondria 0.4957 49.57%
OATP2B1 inhibitior - 0.7119 71.19%
OATP1B1 inhibitior + 0.8535 85.35%
OATP1B3 inhibitior + 0.9372 93.72%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.8250 82.50%
BSEP inhibitior + 0.7246 72.46%
P-glycoprotein inhibitior + 0.6829 68.29%
P-glycoprotein substrate + 0.5557 55.57%
CYP3A4 substrate + 0.6705 67.05%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8531 85.31%
CYP3A4 inhibition - 0.7956 79.56%
CYP2C9 inhibition - 0.7212 72.12%
CYP2C19 inhibition - 0.7987 79.87%
CYP2D6 inhibition - 0.8505 85.05%
CYP1A2 inhibition - 0.5351 53.51%
CYP2C8 inhibition + 0.6573 65.73%
CYP inhibitory promiscuity - 0.8290 82.90%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9200 92.00%
Carcinogenicity (trinary) Non-required 0.5312 53.12%
Eye corrosion - 0.9844 98.44%
Eye irritation - 0.9150 91.50%
Skin irritation - 0.7772 77.72%
Skin corrosion - 0.9323 93.23%
Ames mutagenesis - 0.5923 59.23%
Human Ether-a-go-go-Related Gene inhibition - 0.4904 49.04%
Micronuclear + 0.8900 89.00%
Hepatotoxicity - 0.6696 66.96%
skin sensitisation - 0.8273 82.73%
Respiratory toxicity + 0.7778 77.78%
Reproductive toxicity + 0.9444 94.44%
Mitochondrial toxicity + 0.8875 88.75%
Nephrotoxicity - 0.7849 78.49%
Acute Oral Toxicity (c) III 0.6101 61.01%
Estrogen receptor binding + 0.7874 78.74%
Androgen receptor binding + 0.5879 58.79%
Thyroid receptor binding - 0.5667 56.67%
Glucocorticoid receptor binding - 0.4657 46.57%
Aromatase binding + 0.5908 59.08%
PPAR gamma + 0.6680 66.80%
Honey bee toxicity - 0.7833 78.33%
Biodegradation - 0.8750 87.50%
Crustacea aquatic toxicity - 0.6600 66.00%
Fish aquatic toxicity + 0.8339 83.39%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.60% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.60% 96.09%
CHEMBL3060 Q9Y345 Glycine transporter 2 91.37% 99.17%
CHEMBL2581 P07339 Cathepsin D 89.43% 98.95%
CHEMBL3714130 P46095 G-protein coupled receptor 6 88.76% 97.36%
CHEMBL1293249 Q13887 Kruppel-like factor 5 88.02% 86.33%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 86.85% 95.56%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 86.65% 95.89%
CHEMBL5608 Q16288 NT-3 growth factor receptor 85.96% 95.89%
CHEMBL1806 P11388 DNA topoisomerase II alpha 85.59% 89.00%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 85.10% 96.90%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 83.95% 99.23%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 83.06% 99.15%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 82.86% 96.00%
CHEMBL340 P08684 Cytochrome P450 3A4 81.90% 91.19%
CHEMBL1951 P21397 Monoamine oxidase A 81.83% 91.49%
CHEMBL5028 O14672 ADAM10 80.61% 97.50%
CHEMBL1881 P43116 Prostanoid EP2 receptor 80.08% 93.00%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Selenicereus undatus

Cross-Links

Top
PubChem 162821393
LOTUS LTS0042639
wikiData Q105114346