1,3,6,7-tetrahydroxy-2-[(2R,3S,4R,5R,6S)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyxanthen-9-one

Details

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Internal ID 1690cb4f-59d1-43f5-b07d-b1046b0aba0b
Taxonomy Organoheterocyclic compounds > Benzopyrans > 1-benzopyrans > Xanthones
IUPAC Name 1,3,6,7-tetrahydroxy-2-[(2R,3S,4R,5R,6S)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyxanthen-9-one
SMILES (Canonical) C1=C2C(=CC(=C1O)O)OC3=C(C2=O)C(=C(C(=C3)O)OC4C(C(C(C(O4)CO)O)O)O)O
SMILES (Isomeric) C1=C2C(=CC(=C1O)O)OC3=C(C2=O)C(=C(C(=C3)O)O[C@@H]4[C@H]([C@@H]([C@H]([C@@H](O4)CO)O)O)O)O
InChI InChI=1S/C19H18O12/c20-4-11-14(25)16(27)17(28)19(30-11)31-18-8(23)3-10-12(15(18)26)13(24)5-1-6(21)7(22)2-9(5)29-10/h1-3,11,14,16-17,19-23,25-28H,4H2/t11-,14-,16+,17-,19+/m0/s1
InChI Key TXKFRRCKZWJXBW-BEYRGXLJSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C19H18O12
Molecular Weight 438.30 g/mol
Exact Mass 438.07982601 g/mol
Topological Polar Surface Area (TPSA) 207.00 Ų
XlogP -0.10
Atomic LogP (AlogP) -1.05
H-Bond Acceptor 12
H-Bond Donor 8
Rotatable Bonds 3

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of 1,3,6,7-tetrahydroxy-2-[(2R,3S,4R,5R,6S)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyxanthen-9-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5923 59.23%
Caco-2 - 0.9173 91.73%
Blood Brain Barrier - 0.7250 72.50%
Human oral bioavailability - 0.6143 61.43%
Subcellular localzation Mitochondria 0.5362 53.62%
OATP2B1 inhibitior + 0.5904 59.04%
OATP1B1 inhibitior + 0.8942 89.42%
OATP1B3 inhibitior + 0.9389 93.89%
MATE1 inhibitior - 0.7800 78.00%
OCT2 inhibitior - 0.8000 80.00%
BSEP inhibitior - 0.6511 65.11%
P-glycoprotein inhibitior - 0.7532 75.32%
P-glycoprotein substrate - 0.8496 84.96%
CYP3A4 substrate + 0.5606 56.06%
CYP2C9 substrate - 0.6709 67.09%
CYP2D6 substrate - 0.8582 85.82%
CYP3A4 inhibition - 0.9207 92.07%
CYP2C9 inhibition - 0.9414 94.14%
CYP2C19 inhibition - 0.9119 91.19%
CYP2D6 inhibition - 0.9327 93.27%
CYP1A2 inhibition - 0.9045 90.45%
CYP2C8 inhibition - 0.6561 65.61%
CYP inhibitory promiscuity - 0.8472 84.72%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.7090 70.90%
Eye corrosion - 0.9928 99.28%
Eye irritation - 0.8166 81.66%
Skin irritation - 0.7983 79.83%
Skin corrosion - 0.9715 97.15%
Ames mutagenesis - 0.5400 54.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4817 48.17%
Micronuclear + 0.6033 60.33%
Hepatotoxicity - 0.6875 68.75%
skin sensitisation - 0.8796 87.96%
Respiratory toxicity + 0.7000 70.00%
Reproductive toxicity + 0.6889 68.89%
Mitochondrial toxicity - 0.5375 53.75%
Nephrotoxicity - 0.9230 92.30%
Acute Oral Toxicity (c) III 0.4513 45.13%
Estrogen receptor binding + 0.7503 75.03%
Androgen receptor binding + 0.6583 65.83%
Thyroid receptor binding + 0.6057 60.57%
Glucocorticoid receptor binding + 0.7464 74.64%
Aromatase binding + 0.6042 60.42%
PPAR gamma + 0.6849 68.49%
Honey bee toxicity - 0.6661 66.61%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity - 0.6850 68.50%
Fish aquatic toxicity + 0.7790 77.90%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.55% 91.11%
CHEMBL1806 P11388 DNA topoisomerase II alpha 95.74% 89.00%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 93.26% 94.00%
CHEMBL2581 P07339 Cathepsin D 90.49% 98.95%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 88.93% 94.45%
CHEMBL3401 O75469 Pregnane X receptor 85.95% 94.73%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 85.56% 96.21%
CHEMBL3060 Q9Y345 Glycine transporter 2 85.37% 99.17%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 83.75% 95.56%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 83.51% 99.15%
CHEMBL1951 P21397 Monoamine oxidase A 82.09% 91.49%
CHEMBL3194 P02766 Transthyretin 81.33% 90.71%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 80.94% 86.92%
CHEMBL3137262 O60341 LSD1/CoREST complex 80.93% 97.09%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Smilax leucophylla

Cross-Links

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PubChem 129416151
LOTUS LTS0176614
wikiData Q105266799